Factsheet for Zm00001d005911_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005911_P001
Zm00001d011873_P001
Zm00001d042093_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26560.1	Zm00001d011873_P001	AT1G34570.1	21798944
AT2G26560.1	Zm00001d042093_P001	AT1G34570.1	21798944
AT2G26560.1	Zm00001d005911_P001	AT2G26560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35787	Sorghum	cytosol	94.28	96.44
TraesCS5D01G249800.1	Wheat	cytosol	85.32	84.69
TraesCS5A01G243200.1	Wheat	cytosol	84.33	83.7
HORVU5Hr1G069130.5	Barley	cytosol	84.08	83.46
TraesCS5B01G241100.2	Wheat	cytosol	84.33	83.09
Os09t0462400-00	Rice	cytosol	70.4	82.75
HORVU4Hr1G050060.10	Barley	plastid	48.51	75.58
HORVU3Hr1G101170.1	Barley	mitochondrion, plastid	37.31	74.63
HORVU2Hr1G060260.1	Barley	plastid	50.99	74.55
GSMUA_Achr11P...	Banana	cytosol	57.46	68.34
VIT_18s0001g10850.t01	Wine grape	cytosol	68.66	66.83
VIT_18s0001g10910.t01	Wine grape	cytosol	67.66	65.86
VIT_18s0001g10870.t01	Wine grape	cytosol	67.66	65.86
Bra000578.1-P	Field mustard	cytosol	66.17	65.68
CDY21469	Canola	cytosol, peroxisome, vacuole	66.17	65.36
CDX83197	Canola	cytosol	65.92	65.11
AT2G26560.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	64.93	64.13
VIT_18s0001g10930.t01	Wine grape	cytosol	48.51	62.3
KRH15338	Soybean	cytosol	62.19	61.27
KRH15334	Soybean	cytosol	61.94	61.03
KRH05708	Soybean	cytosol	56.22	59.95
VIT_18s0001g10830.t01	Wine grape	mitochondrion, plasma membrane, plastid	68.41	59.78
VIT_18s0001g10900.t01	Wine grape	cytosol	29.85	59.7
KRH05709	Soybean	cytosol	60.45	59.56
Zm00001d007620_P001	Maize	cytosol, peroxisome, plastid	55.47	54.79
Zm00001d007604_P001	Maize	cytosol, peroxisome, plastid	55.47	54.79
Zm00001d007616_P001	Maize	cytosol, peroxisome, plastid	55.22	54.55
Zm00001d007618_P001	Maize	mitochondrion	54.98	54.3
Zm00001d031813_P001	Maize	extracellular	57.96	53.56
Zm00001d007623_P002	Maize	mitochondrion	55.47	53.35
Zm00001d048841_P001	Maize	mitochondrion, plasma membrane	53.73	52.68
Zm00001d031811_P001	Maize	plastid	56.97	52.52
Zm00001d031815_P001	Maize	cytosol	54.23	49.66
Zm00001d031814_P001	Maize	cytosol, plasma membrane, plastid	50.25	47.98
Zm00001d029412_P001	Maize	mitochondrion	50.75	47.66
Zm00001d042504_P002	Maize	cytosol	46.77	44.66
Zm00001d042041_P001	Maize	cytosol	36.32	38.52
Zm00001d052923_P001	Maize	endoplasmic reticulum, extracellular	44.28	34.97
Zm00001d034340_P001	Maize	cytosol	26.62	24.43
Zm00001d014386_P001	Maize	cytosol, plastid	24.13	23.77
Zm00001d028482_P001	Maize	cytosol	26.37	23.04
Zm00001d033254_P001	Maize	cytosol	23.63	22.14
Zm00001d033256_P001	Maize	cytosol	24.13	21.9
Zm00001d041481_P001	Maize	cytosol	24.13	21.37
Zm00001d018788_P001	Maize	nucleus	24.13	20.82
Zm00001d000203_P001	Maize	cytosol	22.39	20.22
Zm00001d031053_P001	Maize	plastid	24.38	17.53

Protein Annotations

EntrezGene:103647493	Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	UniProt:A0A1D6ERI5	InterPro:Acyl_Trfase/lysoPLipase	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008219	GO:GO:0009056	GO:GO:0009058
GO:GO:0009605	GO:GO:0009607	GO:GO:0009626	GO:GO:0009628	GO:GO:0009987	GO:GO:0016020
GO:GO:0016042	GO:GO:0016298	GO:GO:0016787	GO:GO:0031408	GO:GO:0046686	GO:GO:0051607
GO:GO:0071456	InterPro:IPR002641	ProteinID:ONM22349.1	PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635
PANTHER:PTHR32176	PANTHER:PTHR32176:SF6	SUPFAM:SSF52151	UniParc:UPI0004DE8F63	EnsemblPlantsGene:Zm00001d005911	EnsemblPlants:Zm00001d005911_P001
EnsemblPlants:Zm00001d005911_T001	SEG:seg	:	:	:	:

Description

Patatin-like protein 2

Coordinates

chr2:+:192479201..192482053

Molecular Weight (calculated)

44493.7 Da

IEP (calculated)

8.424

GRAVY (calculated)

-0.187

Length

402 amino acids

Sequence
(BLAST)

001: MEKGKHIQPP TYGNLVTILS IDGGGIRGII PAVVLTFLES ELQKLDGEEA RLADYFDVIA GTSTGGLVTS MLVAPNNTNR PLFAAKDIQA FYMNHAPKIF
101: PQQRGPFGRV MRIFRSLSGP SYDGKYLHDV VRKKLGITRL HETLTDVVIP TFDIKRLQPI IFSSYEVKNE KYNTMDALLS DICISTSAAP TYLPAHYFKT
201: EDCHGNTKEF HLIDGGVAAN NPALVAIGEV TKQIFKENPD FFPIKPMDYG RFLVISLGTG SAKFEANYNA QTAKSWGLLG WLLGSGSTPL VDIFTQASAD
301: MVDIHISAVF KALHSEQNYL RIQDDTLQGT LSSVDVATKE NMEKLARVGD MLLKKPVSQA NLETGHMVPA CHRAEMTNEE ALKRFAKLLS DERRLRKARS
401: PK

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.