Factsheet for Zm00001d042041_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84037	Sorghum	cytosol, extracellular, plastid	14.78	57.73
Zm00001d048841_P001	Maize	mitochondrion, plasma membrane	42.74	39.51
Zm00001d007604_P001	Maize	cytosol, peroxisome, plastid	41.42	38.57
Zm00001d007620_P001	Maize	cytosol, peroxisome, plastid	41.16	38.33
Zm00001d007616_P001	Maize	cytosol, peroxisome, plastid	41.16	38.33
Zm00001d007618_P001	Maize	mitochondrion	40.9	38.08
Zm00001d007623_P002	Maize	mitochondrion	41.16	37.32
Zm00001d005911_P001	Maize	cytosol	38.52	36.32
Zm00001d052923_P001	Maize	endoplasmic reticulum, extracellular	47.49	35.36
Zm00001d031811_P001	Maize	plastid	39.58	34.4
Zm00001d031813_P001	Maize	extracellular	39.05	34.02
Zm00001d042504_P002	Maize	cytosol	37.47	33.73
Zm00001d031815_P001	Maize	cytosol	39.05	33.71
Zm00001d031814_P001	Maize	cytosol, plasma membrane, plastid	36.68	33.02
Zm00001d029412_P001	Maize	mitochondrion	35.88	31.78
TraesCS7A01G012900.1	Wheat	cytosol	35.88	24.77
HORVU2Hr1G126660.1	Barley	cytosol, nucleus	36.15	24.33
Zm00001d034340_P001	Maize	cytosol	23.22	20.09
Zm00001d028482_P001	Maize	cytosol	22.96	18.91
Zm00001d033254_P001	Maize	cytosol	21.11	18.65
Zm00001d033256_P001	Maize	cytosol	21.11	18.06
Zm00001d018788_P001	Maize	nucleus	21.9	17.81
HORVU2Hr1G126570.1	Barley	extracellular	16.36	17.37
Zm00001d000203_P001	Maize	cytosol	19.79	16.85
Zm00001d041481_P001	Maize	cytosol	20.05	16.74
Zm00001d014386_P001	Maize	cytosol, plastid	17.94	16.67
Zm00001d031053_P001	Maize	plastid	20.58	13.95

Protein Annotations

Gene3D:3.40.1090.10	MapMan:35.1	UniProt:A0A1D6N0Q3	InterPro:Acyl_Trfase/lysoPLipase	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787
InterPro:IPR002641	ProteinID:ONM34366.1	PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32176
PANTHER:PTHR32176:SF10	SUPFAM:SSF52151	UniParc:UPI0008436698	EnsemblPlantsGene:Zm00001d042041	EnsemblPlants:Zm00001d042041_P001	EnsemblPlants:Zm00001d042041_T001
SEG:seg	:	:	:	:	:

Description

Patatin-like protein 2

Coordinates

chr3:-:148342539..148346692

Molecular Weight (calculated)

42349.4 Da

IEP (calculated)

9.758

GRAVY (calculated)

-0.164

Length

379 amino acids

Sequence
(BLAST)

001: MGGGGSKAPF SNTNTDAASP EKLPPLERLP PARYGKHITM LSIDGGGIRG LIPLVILESL EKKLQDLDGK QARIADYFDV IAGTSTGGLI AAMLAAPDEE
101: RKRPRFRVQE ITSFYKDHGH NIFKRDGLLG LLYRAIPLMP VLMGPKYDGV YLRDRIEEKM KGLTMGDTRT NIVVPAFNVR SMMPVVFSSF GPRRGPWSRL
201: ADICIATSAA PTYFPAHNFP IRSSTTNGSQ YHHDLVDGGL AANNPTMIAM AMVAQQINHY RNRYFPPRLD YDKLIVVSLG TTYAKEIDSY TAGDVAQWGA
301: LRWVRDGPRR TPLFDMLSCA NDYLVNVNIA FLFHSKKFQN NYLRIQDVTL VNNLISATIY ILLYHTVNLT IITLKTKEY

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.