Factsheet for Zm00001d042504_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88041	Sorghum	cytosol	85.75	87.41
Os01t0898500-01	Rice	plastid	70.55	72.26
Zm00001d005911_P001	Maize	cytosol	44.66	46.77
Zm00001d007620_P001	Maize	cytosol, peroxisome, plastid	44.18	45.7
Zm00001d007616_P001	Maize	cytosol, peroxisome, plastid	44.18	45.7
Zm00001d007604_P001	Maize	cytosol, peroxisome, plastid	44.18	45.7
Zm00001d048841_P001	Maize	mitochondrion, plasma membrane	44.42	45.61
Zm00001d007618_P001	Maize	mitochondrion	43.71	45.21
Zm00001d031811_P001	Maize	plastid	46.56	44.95
Zm00001d031813_P001	Maize	extracellular	46.32	44.83
Zm00001d007623_P002	Maize	mitochondrion	44.42	44.74
Zm00001d031815_P001	Maize	cytosol	46.32	44.42
Zm00001d029412_P001	Maize	mitochondrion	44.66	43.93
Zm00001d031814_P001	Maize	cytosol, plasma membrane, plastid	42.52	42.52
PGSC0003DMT400040802	Potato	mitochondrion	14.73	41.33
Solyc02g090660.1.1	Tomato	cytosol, peroxisome, plastid	26.6	40.58
Zm00001d042041_P001	Maize	cytosol	33.73	37.47
Zm00001d052923_P001	Maize	endoplasmic reticulum, extracellular	37.53	31.04
Zm00001d028482_P001	Maize	cytosol	23.99	21.96
Zm00001d014386_P001	Maize	cytosol, plastid	20.67	21.32
Zm00001d033254_P001	Maize	cytosol	21.62	21.21
Zm00001d018788_P001	Maize	nucleus	23.04	20.82
Zm00001d034340_P001	Maize	cytosol	21.38	20.55
Zm00001d033256_P001	Maize	cytosol	21.38	20.32
Zm00001d000203_P001	Maize	cytosol	20.9	19.78
Zm00001d041481_P001	Maize	cytosol	21.14	19.6
Zm00001d031053_P001	Maize	plastid	21.62	16.28

Protein Annotations

EntrezGene:100273985	Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	InterPro:Acyl_Trfase/lysoPLipase	UniProt:B4FNC5	EMBL:BT038613
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016042	GO:GO:0016787	InterPro:IPR002641	ProteinID:ONM35566.1	ProteinID:ONM35569.1	PFAM:PF01734
InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF11	SUPFAM:SSF52151	UniParc:UPI00017B6BED
EnsemblPlantsGene:Zm00001d042504	EnsemblPlants:Zm00001d042504_P002	EnsemblPlants:Zm00001d042504_T002	:	:	:

Description

Patatin-like protein 2

Coordinates

chr3:-:169713522..169717584

Molecular Weight (calculated)

46212.0 Da

IEP (calculated)

8.198

GRAVY (calculated)

-0.060

Length

421 amino acids

Sequence
(BLAST)

001: MENNYACPPP SKGNLITVLS IDGGGVKGVI PATFLAFLES KLQELDGSSA RIANYFDVIA GTSTGGLIAA MLAAPSLSNA KQPCYEAKDI VPFYLEHSPR
101: IFPCRTGILG WFFKILQTVK VMIGPKYDGK YLHKVTSDLL GGTRVEETLT NVVIPTFDVK CVKPTIFSTF KARSSALMNA RLADVCIGTS AAPTVLPAHY
201: FETVDHRTGA SRSFNVIDGG LAANNPTLVA MGEITEQMRQ KSKEFPETKP LDYHRYLVVS LGTGLPEQDI KFDACRVAKW GIFGWLGRRE NTVPLLQMFM
301: HASSDMTDSY VADLFKAIGC SDQLLLRVQD RNIPIAAVAA DLSTEKNLRG LVKIAENLLH KPLGEDDYKT DDRVETTPRD GRAILTYAGM LARFAKLLSD
401: ERKLRLQNMG HCMPVIANRE A

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.