Factsheet for Zm00001d018788_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97967	Sorghum	nucleus	80.47	76.22
Zm00001d034340_P001	Maize	cytosol	53.43	56.85
GSMUA_Achr8P07160_001	Banana	cytosol	41.42	51.06
GSMUA_Achr11P...	Banana	cytosol	30.04	50.0
Zm00001d033254_P001	Maize	cytosol	45.71	49.65
Zm00001d041481_P001	Maize	cytosol	47.21	48.46
GSMUA_Achr2P01360_001	Banana	cytosol	41.42	48.37
Zm00001d033256_P001	Maize	cytosol	45.71	48.08
GSMUA_Achr5P26630_001	Banana	cytosol	35.41	47.83
VIT_10s0092g00150.t01	Wine grape	cytosol	43.78	47.78
Zm00001d000203_P001	Maize	cytosol	45.28	47.42
Zm00001d014386_P001	Maize	cytosol, plastid	41.2	47.06
KRH36757	Soybean	cytosol	42.92	46.08
KRH11757	Soybean	cytosol	42.49	45.83
Os07t0144500-00	Rice	mitochondrion, plastid	39.7	44.47
Solyc10g080690.1.1	Tomato	cytosol	41.2	44.44
PGSC0003DMT400060932	Potato	cytosol	40.77	44.29
PGSC0003DMT400021555	Potato	cytosol	41.2	44.14
Solyc10g078530.1.1	Tomato	cytosol	41.2	44.14
Zm00001d028482_P001	Maize	cytosol	40.77	41.3
Zm00001d031053_P001	Maize	plastid	45.71	38.1
Zm00001d031811_P001	Maize	plastid	23.18	24.77
Zm00001d029412_P001	Maize	mitochondrion	22.75	24.77
Zm00001d048841_P001	Maize	mitochondrion, plasma membrane	21.24	24.15
Zm00001d005911_P001	Maize	cytosol	20.82	24.13
Zm00001d007620_P001	Maize	cytosol, peroxisome, plastid	21.03	24.08
Zm00001d007616_P001	Maize	cytosol, peroxisome, plastid	21.03	24.08
Zm00001d007604_P001	Maize	cytosol, peroxisome, plastid	21.03	24.08
Zm00001d031813_P001	Maize	extracellular	22.32	23.91
Zm00001d007618_P001	Maize	mitochondrion	20.82	23.83
Zm00001d007623_P002	Maize	mitochondrion	21.03	23.45
Zm00001d042504_P002	Maize	cytosol	20.82	23.04
Zm00001d031815_P001	Maize	cytosol	21.67	23.01
Zm00001d042041_P001	Maize	cytosol	17.81	21.9
Zm00001d031814_P001	Maize	cytosol, plasma membrane, plastid	19.53	21.62
Zm00001d052923_P001	Maize	endoplasmic reticulum, extracellular	22.75	20.83

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	UniProt:A0A1D6HS50	InterPro:Acyl_Trfase/lysoPLipase	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787
InterPro:IPR002641	ProteinID:ONM51289.1	PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32241
PANTHER:PTHR32241:SF8	SUPFAM:SSF52151	UniParc:UPI0008440E50	EnsemblPlantsGene:Zm00001d018788	EnsemblPlants:Zm00001d018788_P001	EnsemblPlants:Zm00001d018788_T001
SEG:seg	:	:	:	:	:

Description

Patatin-like protein 6

Coordinates

chr7:-:5218113..5220263

Molecular Weight (calculated)

48133.4 Da

IEP (calculated)

10.514

GRAVY (calculated)

-0.148

Length

466 amino acids

Sequence
(BLAST)

001: MEEAATDREQ GKDDDVDAAA GSLTYEIFSL LESKFLFGCD AVRPSGRRLL PPATASASTG KVCVLSIDGG ARAADGLLAG AALVRLEAAL RRRSGSPAAR
101: LADFFDVAAG SGAGGVLAAL LFARGPPMFS ADDALAFLLR RARRHRFAGG LGLLRLAHRG RPFPSSSSSS AAAAAFGRAL GDLTLRDTVR PVLVPCYDLA
201: TRAPFLFSRA DAAERAAHDF RLRDVCAATC AAGAGRVVEV ASVDGATRVR AVGGGGALGN PTAAAITHVL NNRREFPGAA SIDDLLVLSI GTGAGAGEPE
301: AASIAAEGVS DMVDQAVAMA FGRSRTTNYI RIQGTGGRCG GGRAPRACGG EAKQQAVWKA EAMLLQRGVE SVLFQGRKLS GETNAEKVER FAREMAKEHA
401: RRKKKKQQQQ QMGPCLPVVA AATSGAAAPP NNDKQPPPPL PTTTTANAAK KKHTPATSRL DGGGTR

Best Arabidopsis Sequence Match ( AT3G54950.1 )
(BLAST)

001: MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER

Arabidopsis Description

PLP7Patatin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV43]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.