Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d033254_P001 | Maize | cytosol | 81.94 | 84.62 |
| Zm00001d000203_P001 | Maize | cytosol | 78.78 | 78.43 |
| OQU91280 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 76.52 | 78.11 |
| TraesCS5D01G385900.1 | Wheat | cytosol | 75.62 | 75.62 |
| TraesCSU01G072800.1 | Wheat | cytosol | 74.49 | 75.0 |
| Os03t0640000-00 | Rice | cytosol | 74.49 | 74.83 |
| HORVU5Hr1G093250.4 | Barley | cytosol | 75.17 | 74.0 |
| TraesCS5B01G379300.1 | Wheat | plastid | 75.39 | 68.87 |
| Zm00001d041481_P001 | Maize | cytosol | 69.53 | 67.84 |
| GSMUA_Achr8P07160_001 | Banana | cytosol | 43.57 | 51.06 |
| Zm00001d031053_P001 | Maize | plastid | 64.11 | 50.8 |
| Zm00001d034340_P001 | Maize | cytosol | 49.44 | 50.0 |
| GSMUA_Achr11P... | Banana | cytosol | 30.7 | 48.57 |
| GSMUA_Achr2P01360_001 | Banana | cytosol | 43.57 | 48.37 |
| Zm00001d014386_P001 | Maize | cytosol, plastid | 43.79 | 47.55 |
| GSMUA_Achr5P26630_001 | Banana | cytosol | 36.79 | 47.25 |
| Zm00001d018788_P001 | Maize | nucleus | 48.08 | 45.71 |
| KRH36757 | Soybean | cytosol | 44.02 | 44.93 |
| KRH11757 | Soybean | cytosol | 43.79 | 44.91 |
| VIT_10s0092g00150.t01 | Wine grape | cytosol | 42.44 | 44.03 |
| PGSC0003DMT400021555 | Potato | cytosol | 41.31 | 42.07 |
| PGSC0003DMT400060932 | Potato | cytosol | 40.41 | 41.72 |
| Solyc10g078530.1.1 | Tomato | cytosol | 40.86 | 41.61 |
| Solyc10g080690.1.1 | Tomato | cytosol | 40.41 | 41.44 |
| Zm00001d028482_P001 | Maize | cytosol | 41.53 | 40.0 |
| Zm00001d005911_P001 | Maize | cytosol | 21.9 | 24.13 |
| Zm00001d029412_P001 | Maize | mitochondrion | 22.8 | 23.6 |
| Zm00001d031811_P001 | Maize | plastid | 22.12 | 22.48 |
| Zm00001d031815_P001 | Maize | cytosol | 22.12 | 22.32 |
| Zm00001d031813_P001 | Maize | extracellular | 21.44 | 21.84 |
| Zm00001d042504_P002 | Maize | cytosol | 20.32 | 21.38 |
| Zm00001d042041_P001 | Maize | cytosol | 18.06 | 21.11 |
| Zm00001d048841_P001 | Maize | mitochondrion, plasma membrane | 19.19 | 20.73 |
| Zm00001d031814_P001 | Maize | cytosol, plasma membrane, plastid | 19.64 | 20.67 |
| Zm00001d007616_P001 | Maize | cytosol, peroxisome, plastid | 18.96 | 20.64 |
| Zm00001d007620_P001 | Maize | cytosol, peroxisome, plastid | 18.96 | 20.64 |
| Zm00001d007618_P001 | Maize | mitochondrion | 18.96 | 20.64 |
| Zm00001d007604_P001 | Maize | cytosol, peroxisome, plastid | 18.96 | 20.64 |
| Zm00001d007623_P002 | Maize | mitochondrion | 19.19 | 20.33 |
| Zm00001d052923_P001 | Maize | endoplasmic reticulum, extracellular | 21.9 | 19.06 |
Protein Annotations
| Gene3D:3.40.1090.10 | MapMan:5.7.2.2.4 | UniProt:A0A1D6KX89 | InterPro:Acyl_Trfase/lysoPLipase | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 | GO:GO:0016787 |
| InterPro:IPR002641 | ProteinID:ONM07074.1 | PFAM:PF01734 | InterPro:PNPLA_dom | PFscan:PS51635 | PANTHER:PTHR32241 |
| PANTHER:PTHR32241:SF4 | SUPFAM:SSF52151 | UniParc:UPI000221495A | EnsemblPlantsGene:Zm00001d033256 | EnsemblPlants:Zm00001d033256_P001 | EnsemblPlants:Zm00001d033256_T001 |
| SEG:seg | : | : | : | : | : |
Description
Patatin-like protein 6
Coordinates
chr1:-:256169812..256171143
Molecular Weight (calculated)
45975.8 Da
IEP (calculated)
9.407
GRAVY (calculated)
-0.020
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAYAATASP PTTTAMCVDK LSHQLFSLLE TRLLGGWCPS VPGTPARALL DGGRVRVLAI DGCGAGAEDA LLAAAALARL EARLRDRTGD PDARVADFFD
101: VAAGAGAGGV LAAMLLLRGA DGRPRYSAQE ALAFVAGSVG TKGWCGRRGR WAKLFRRGSR GGDRTLRRVF GDATLRDTVA PLLVPCYDLA TAAPFVFSRA
201: DAVESDTFDF RLRDVCAAAC AAGGAVAPVR SVDGLTAVAA ASGGVAAMCN PAGTAITHAL HNKQEFPLAT GVDDLLVLSI GAGASAANGS STPMPARSPS
301: PRELARVTAE GVADMVDESL GMAFGRARGS NYVRIQAGKA LVPIRTDEAS VAAEAMLAQR NVESVLFRER RLSERTNAEK VDALAAELVK EQERRRRSPL
401: PNVAIKQVGT PARLSSATTA SSGTGTARTA STMPSPASWE SRR
101: VAAGAGAGGV LAAMLLLRGA DGRPRYSAQE ALAFVAGSVG TKGWCGRRGR WAKLFRRGSR GGDRTLRRVF GDATLRDTVA PLLVPCYDLA TAAPFVFSRA
201: DAVESDTFDF RLRDVCAAAC AAGGAVAPVR SVDGLTAVAA ASGGVAAMCN PAGTAITHAL HNKQEFPLAT GVDDLLVLSI GAGASAANGS STPMPARSPS
301: PRELARVTAE GVADMVDESL GMAFGRARGS NYVRIQAGKA LVPIRTDEAS VAAEAMLAQR NVESVLFRER RLSERTNAEK VDALAAELVK EQERRRRSPL
401: PNVAIKQVGT PARLSSATTA SSGTGTARTA STMPSPASWE SRR
001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF
Arabidopsis Description
PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.