Factsheet for HORVU5Hr1G093250.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G385900.1	Wheat	cytosol	96.67	98.19
TraesCSU01G072800.1	Wheat	cytosol	95.56	97.73
TraesCS5B01G379300.1	Wheat	plastid	96.89	89.9
Zm00001d033254_P001	Maize	cytosol	76.22	79.95
Os03t0640000-00	Rice	cytosol	78.0	79.59
EER91181	Sorghum	plastid	78.22	76.36
EER93762	Sorghum	plastid	75.33	76.18
OQU91280	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	72.89	75.58
Zm00001d000203_P001	Maize	cytosol	74.67	75.51
Zm00001d033256_P001	Maize	cytosol	74.0	75.17
HORVU5Hr1G011400.6	Barley	mitochondrion	61.11	61.38
GSMUA_Achr8P07160_001	Banana	cytosol	43.56	51.85
GSMUA_Achr11P...	Banana	cytosol	30.44	48.93
GSMUA_Achr5P26630_001	Banana	cytosol	37.11	48.41
GSMUA_Achr2P01360_001	Banana	cytosol	42.89	48.37
HORVU5Hr1G103060.1	Barley	mitochondrion	50.22	47.58
VIT_10s0092g00150.t01	Wine grape	cytosol	44.0	46.37
KRH36757	Soybean	cytosol	44.0	45.62
KRH11757	Soybean	cytosol	43.78	45.6
Solyc10g080690.1.1	Tomato	cytosol	42.67	44.44
PGSC0003DMT400060932	Potato	cytosol	42.22	44.29
PGSC0003DMT400021555	Potato	cytosol	42.67	44.14
Solyc10g078530.1.1	Tomato	cytosol	42.0	43.45
HORVU7Hr1G106600.4	Barley	cytosol	24.22	42.41
HORVU0Hr1G008670.3	Barley	cytosol	31.33	34.9
HORVU5Hr1G069130.5	Barley	cytosol	22.44	24.94
HORVU7Hr1G113030.2	Barley	plastid	14.0	24.14
HORVU4Hr1G074970.1	Barley	mitochondrion	22.44	23.93
HORVU4Hr1G019140.24	Barley	cytosol	11.11	23.04
HORVU1Hr1G012140.1	Barley	plastid	20.44	22.55
HORVU5Hr1G119810.5	Barley	cytosol	19.33	22.54
HORVU2Hr1G037280.1	Barley	cytosol	12.89	22.48
HORVU1Hr1G069200.2	Barley	cytosol	20.0	22.17
HORVU4Hr1G075070.7	Barley	plastid	20.89	21.61
HORVU5Hr1G119820.1	Barley	plastid	18.67	21.16
HORVU2Hr1G029000.2	Barley	cytosol	19.33	21.12
HORVU3Hr1G101170.1	Barley	mitochondrion, plastid	9.33	20.9
HORVU7Hr1G113080.1	Barley	cytosol	21.33	20.56
HORVU7Hr1G036460.1	Barley	plasma membrane	20.44	20.13
HORVU2Hr1G060260.1	Barley	plastid	12.22	20.0
HORVU6Hr1G001990.1	Barley	cytosol	19.33	19.33
HORVU4Hr1G050060.10	Barley	plastid	10.89	18.99
HORVU7Hr1G006840.3	Barley	cytosol	12.22	18.97
HORVU3Hr1G004220.4	Barley	cytosol, plastid	19.78	18.54
HORVU6Hr1G027900.2	Barley	cytosol	14.0	18.37
HORVU2Hr1G126660.1	Barley	cytosol, nucleus	19.78	15.81
HORVU2Hr1G126570.1	Barley	extracellular	9.11	11.48

Protein Annotations

EnsemblPlants:HORVU5Hr1G093250.4	EnsemblPlantsGene:HORVU5Hr1G093250	Gene3D:3.40.1090.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	InterPro:Acyl_Trfase/lysoPLipase
InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PANTHER:PTHR32241:SF4	PFAM:PF01734	PFscan:PS51635
SEG:seg	SUPFAM:SSF52151	UniParc:UPI000B47ACF8	UniProt:A0A287S9W5	MapMan:5.7.2.2.4	:

Description

Patatin [Source:UniProtKB/TrEMBL;Acc:A0A287S9W5]

Coordinates

chrchr5H:+:591083556..591084908

Molecular Weight (calculated)

46346.9 Da

IEP (calculated)

7.705

GRAVY (calculated)

0.060

Length

450 amino acids

Sequence
(BLAST)

001: VPCFAAEMEA MASPVPMDVD KLSYEIFALL ESKFLFGAGG AGCLSGPGTP FRGASDGRVR VLAVDGCGAG AGDALLAAAA LARLEAGLRQ RAGDPDARVA
101: DFFDVAAGAG AGGVLAAMLF LKGADGRPRY TAEEALAFVA GSVGKDWGGR RRGWTKLFRG GARKAERSFR RVFGDATLRD TVAPVLVPCY DLATGAPFMF
201: SRADAVESDS FDFRLADVCA ATCAASGAAA AVRSVDGRTA IAAASGAVAA MGNPASAAIT HVLHNKQEFP LAVSMDDILV LSIGTGASSS AATCGHGWST
301: PMPTRSPSRD ELARVTAQGV ADMVDEAVAM AFGHASDSNY VRLQASSALD SPCTQTAGAA AGAMLSQRNV ESVLFRGRRL SDRTNAEKVD ALAAELVKEQ
401: ERRMRSPLPN VVIKQVASPR LSSATTASSV TATVRTASTM PSPASWDSRQ

Best Arabidopsis Sequence Match ( AT3G54950.1 )
(BLAST)

001: MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER

Arabidopsis Description

PLP7Patatin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV43]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.