CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
vacuole 1
mitochondrion 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033254_P001	Maize	cytosol	84.6	90.91
EER93762	Sorghum	plastid	85.9	88.99
Zm00001d000203_P001	Maize	cytosol	83.73	86.74
OQU91280	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	77.87	82.72
TraesCS5D01G385900.1	Wheat	cytosol	76.36	79.46
Os03t0640000-00	Rice	cytosol	75.92	79.37
TraesCSU01G072800.1	Wheat	cytosol	75.7	79.32
HORVU5Hr1G093250.4	Barley	cytosol	76.36	78.22
TraesCS5B01G379300.1	Wheat	plastid	76.36	72.58
OQU79585	Sorghum	cytosol	70.28	66.94
GSMUA_Achr8P07160_001	Banana	cytosol	44.03	53.7
EER90785	Sorghum	cytosol	51.19	52.56
GSMUA_Achr11P...	Banana	cytosol	31.24	51.43
GSMUA_Achr2P01360_001	Banana	cytosol	44.25	51.13
GSMUA_Achr5P26630_001	Banana	cytosol	37.74	50.43
KRH11757	Soybean	cytosol	44.25	47.22
KRH36757	Soybean	cytosol	44.25	47.0
VIT_10s0092g00150.t01	Wine grape	cytosol	42.08	45.43
EER95163	Sorghum	cytosol	44.03	44.13
EER97967	Sorghum	nucleus	47.07	44.11
Solyc10g080690.1.1	Tomato	cytosol	41.0	43.75
PGSC0003DMT400021555	Potato	cytosol	41.21	43.68
PGSC0003DMT400060932	Potato	cytosol	40.56	43.59
EER90215	Sorghum	plastid	44.25	43.31
Solyc10g078530.1.1	Tomato	cytosol	40.78	43.22
OQU84037	Sorghum	cytosol, extracellular, plastid	8.46	40.21
KXG25325	Sorghum	plastid	22.56	23.8
OQU80645	Sorghum	cytosol	20.61	23.69
EER94748	Sorghum	mitochondrion	22.13	23.34
KXG35787	Sorghum	cytosol	19.52	22.9
OQU88041	Sorghum	cytosol	19.96	22.28
EES15134	Sorghum	plastid	20.39	21.61
EER99713	Sorghum	cytosol	18.87	21.59
EES08840	Sorghum	cytosol	18.44	20.99
EES10106	Sorghum	plastid	18.44	20.73
EES08841	Sorghum	cytosol	18.44	20.58
OQU80643	Sorghum	cytosol	19.96	18.7
EES10271	Sorghum	cytosol	14.1	18.47
OQU83677	Sorghum	cytosol	8.68	12.01

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	EntrezGene:8062220	InterPro:Acyl_Trfase/lysoPLipase	UniProt:C5WR89	EnsemblPlants:EER91181
ProteinID:EER91181	ProteinID:EER91181.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	InterPro:IPR002641	PFAM:PF01734
InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32241	PANTHER:PTHR32241:SF4	EnsemblPlantsGene:SORBI_3001G157700	SUPFAM:SSF52151
unigene:Sbi.11758	UniParc:UPI0001A8211F	RefSeq:XP_002464183.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:12780905..12782387

Molecular Weight (calculated)

47017.7 Da

IEP (calculated)

9.025

GRAVY (calculated)

0.036

Length

461 amino acids

Sequence
(BLAST)

001: MEAYAAMASP PPPTTTKAVV DKLSYEIFSL LESKFLFGAG AGCLSSSVPG TPARALLDGG RVRVLAIDGC GAGAEDALLA AAALARLEAG LRDRTGDPDA
101: RAADFFDLAA GAGAGGVLAA MLFLRGPDGR PRYTADDALA FVAASVGGKG KGWGGGRRGP RWAKLFRGAR GGGDGDDRSF RRVFGDATLR DTVAPLLVPC
201: YDLATAAPFV FSRADAVESD SFDFRLRDVG AATCAAGGAL ATVRSVDGAT AIAAASGGVA AMGNPAAAAV THVLHNKQEF PLATGVEDLL VLSIGAGASS
301: ATVSVCDGSS TPIPTRSPSP RELARVTAEG VADMVDESVA MAFGYACGSN YVRIQAGKAP APLQAATASA AAGAMLAQRN VESVLFRGRR LSQRTNAEKV
401: DALAVELVKE QDRRRRSPLP NVAIKQVATP RLSSATTTSS GTVTARTAST MPSPASWDSR R

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.