CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
EES04224
KXG35787

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26560.1	EES04224	AT1G34570.1	21798944
AT2G26560.1	KXG35787	AT2G26560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005911_P001	Maize	cytosol	96.44	94.28
Os09t0462400-00	Rice	cytosol	71.76	82.46
TraesCS5D01G249800.1	Wheat	cytosol	84.73	82.22
TraesCS5A01G243200.1	Wheat	cytosol	83.72	81.23
HORVU5Hr1G069130.5	Barley	cytosol	83.46	80.99
TraesCS5B01G241100.2	Wheat	cytosol	83.97	80.88
HORVU4Hr1G050060.10	Barley	plastid	50.13	76.36
HORVU3Hr1G101170.1	Barley	mitochondrion, plastid	38.68	75.62
HORVU2Hr1G060260.1	Barley	plastid	49.62	70.91
GSMUA_Achr11P...	Banana	cytosol	56.49	65.68
Bra000578.1-P	Field mustard	cytosol	66.67	64.69
VIT_18s0001g10850.t01	Wine grape	cytosol	67.94	64.65
CDY21469	Canola	cytosol, peroxisome, vacuole	66.67	64.37
VIT_18s0001g10910.t01	Wine grape	cytosol	67.43	64.16
VIT_18s0001g10870.t01	Wine grape	cytosol	67.43	64.16
CDX83197	Canola	cytosol	66.41	64.13
AT2G26560.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	64.89	62.65
VIT_18s0001g10930.t01	Wine grape	cytosol	48.09	60.38
KRH15338	Soybean	cytosol	62.34	60.05
KRH15334	Soybean	cytosol	62.09	59.8
KRH05708	Soybean	cytosol	56.74	59.15
KRH05709	Soybean	cytosol	60.05	57.84
OQU84037	Sorghum	cytosol, extracellular, plastid	14.25	57.73
VIT_18s0001g10830.t01	Wine grape	mitochondrion, plasma membrane, plastid	67.43	57.61
VIT_18s0001g10900.t01	Wine grape	cytosol	28.75	56.22
OQU80645	Sorghum	cytosol	53.69	52.62
EES15134	Sorghum	plastid	57.0	51.49
KXG25325	Sorghum	plastid	57.25	51.49
EES10106	Sorghum	plastid	53.69	51.46
EES08840	Sorghum	cytosol	52.93	51.36
EES08841	Sorghum	cytosol	53.94	51.33
EER99713	Sorghum	cytosol	50.89	49.63
OQU88041	Sorghum	cytosol	47.33	45.04
EER94748	Sorghum	mitochondrion	48.85	43.94
OQU80643	Sorghum	cytosol	53.18	42.48
EES10271	Sorghum	cytosol	32.32	36.08
OQU83677	Sorghum	cytosol	23.66	27.93
EER90785	Sorghum	cytosol	26.46	23.16
EER95163	Sorghum	cytosol	26.21	22.39
OQU91280	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	23.66	21.43
EER93762	Sorghum	plastid	23.41	20.67
EER91181	Sorghum	plastid	22.9	19.52
EER97967	Sorghum	nucleus	24.43	19.51
OQU79585	Sorghum	cytosol	23.41	19.01
EER90215	Sorghum	plastid	22.65	18.9

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	UniProt:A0A1B6QCY8	InterPro:Acyl_Trfase/lysoPLipase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0008219	GO:GO:0009056	GO:GO:0009058	GO:GO:0009605
GO:GO:0009607	GO:GO:0009626	GO:GO:0009628	GO:GO:0009987	GO:GO:0016020	GO:GO:0016042
GO:GO:0016298	GO:GO:0016787	GO:GO:0031408	GO:GO:0046686	GO:GO:0051607	GO:GO:0071456
InterPro:IPR002641	EnsemblPlants:KXG35787	ProteinID:KXG35787	ProteinID:KXG35787.1	PFAM:PF01734	InterPro:PNPLA_dom
PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF6	EnsemblPlantsGene:SORBI_3002G228700	SUPFAM:SSF52151	UniParc:UPI00081ABA0D
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:61996126..61998393

Molecular Weight (calculated)

43378.5 Da

IEP (calculated)

7.197

GRAVY (calculated)

-0.095

Length

393 amino acids

Sequence
(BLAST)

001: MEKGKHIQPP TYGNLVTILS IDGGGIRGII PAVVLTFLES ELQKLDGEEA RLADYFDVVA GTSTGGLVTS MLVAPNNTNR PLFAAKDIQA FYMNHAPKIF
101: PQQRGPFGKI MRIFRSLSGP SYDGKYLHDV VRKKLGITRL HETLTDVVIP TFDIKRLQPI IFSSYEVKNE KYNTMDALLS DICISTSAAP TYLPAHYFKT
201: EDCHGNTKEF HLIDGGVAAN NPALVAIGEV TKQIFKENPD FFPIKPMDYG RFLVISLGTG SAKFEANYNA QKAKSWGVLG WLLGSGSTPL VDIFTQASAD
301: MVDIHISAVF KALHSEQNYL RIQDDTLQGT LSSVDVATKE NMEKLARVGD MLLKKPVSHV NLETGHMVPA CHRTEMTNEE ALKRLVLPLH LLS

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.