Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G26560.1 | CDY03143 | AT1G34570.1 | 21798944 |
| AT2G26560.1 | CDY12037 | AT1G34570.1 | 21798944 |
| AT2G26560.1 | CDX83197 | AT2G26560.1 | 21798944 |
| AT2G26560.1 | CDY21469 | AT2G26560.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000578.1-P | Field mustard | cytosol | 98.53 | 99.01 |
| CDY21469 | Canola | cytosol, peroxisome, vacuole | 98.53 | 98.53 |
| AT2G26560.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 87.47 | 87.47 |
| VIT_18s0001g10910.t01 | Wine grape | cytosol | 68.06 | 67.07 |
| VIT_18s0001g10850.t01 | Wine grape | cytosol | 68.06 | 67.07 |
| VIT_18s0001g10870.t01 | Wine grape | cytosol | 67.81 | 66.83 |
| KXG35787 | Sorghum | cytosol | 64.13 | 66.41 |
| TraesCS5D01G249800.1 | Wheat | cytosol | 65.85 | 66.17 |
| Zm00001d005911_P001 | Maize | cytosol | 65.11 | 65.92 |
| HORVU5Hr1G069130.5 | Barley | cytosol | 65.36 | 65.68 |
| TraesCS5A01G243200.1 | Wheat | cytosol | 65.11 | 65.43 |
| TraesCS5B01G241100.2 | Wheat | cytosol | 65.11 | 64.95 |
| Os09t0462400-00 | Rice | cytosol | 54.05 | 64.33 |
| GSMUA_Achr11P... | Banana | cytosol | 52.09 | 62.72 |
| VIT_18s0001g10900.t01 | Wine grape | cytosol | 30.96 | 62.69 |
| KRH15338 | Soybean | cytosol | 61.92 | 61.76 |
| KRH15334 | Soybean | cytosol | 61.67 | 61.52 |
| VIT_18s0001g10830.t01 | Wine grape | mitochondrion, plasma membrane, plastid | 68.06 | 60.22 |
| KRH05709 | Soybean | cytosol | 60.2 | 60.05 |
| KRH05708 | Soybean | cytosol | 54.05 | 58.36 |
| HORVU3Hr1G101170.1 | Barley | mitochondrion, plastid | 28.75 | 58.21 |
| CDX72620 | Canola | cytosol | 56.76 | 56.07 |
| CDX69271 | Canola | cytosol | 56.02 | 56.02 |
| HORVU4Hr1G050060.10 | Barley | plastid | 35.14 | 55.43 |
| CDX75621 | Canola | cytosol | 55.28 | 55.28 |
| CDY42720 | Canola | cytosol | 55.77 | 54.96 |
| HORVU2Hr1G060260.1 | Barley | plastid | 36.85 | 54.55 |
| GSMUA_Achr9P27010_001 | Banana | cytosol | 56.76 | 53.85 |
| HORVU4Hr1G019140.24 | Barley | cytosol | 28.5 | 53.46 |
| CDX72619 | Canola | cytosol | 51.84 | 51.72 |
| CDX75619 | Canola | cytosol | 51.35 | 51.23 |
| GSMUA_Achr7P12940_001 | Banana | cytosol | 59.21 | 50.63 |
| CDX69269 | Canola | cytosol | 51.6 | 50.6 |
| CDX75620 | Canola | cytosol, peroxisome, plastid | 49.88 | 50.12 |
| CDX69270 | Canola | cytosol, peroxisome, plastid | 49.63 | 49.88 |
| CDY42719 | Canola | cytosol | 51.6 | 29.49 |
| CDX89181 | Canola | cytosol | 22.85 | 24.03 |
| CDX93922 | Canola | cytosol | 22.6 | 23.77 |
| CDX74862 | Canola | cytosol | 26.04 | 23.61 |
| CDY56455 | Canola | cytosol | 20.88 | 23.22 |
| CDX76689 | Canola | cytosol | 21.87 | 23.12 |
| CDX67618 | Canola | mitochondrion | 26.29 | 22.96 |
| CDY24974 | Canola | cytosol | 26.78 | 22.9 |
| CDY07662 | Canola | cytosol | 26.78 | 22.9 |
| CDY44633 | Canola | cytosol | 26.78 | 22.43 |
| CDY56960 | Canola | mitochondrion | 26.29 | 22.02 |
| CDY07512 | Canola | mitochondrion | 25.55 | 21.89 |
| CDX73423 | Canola | mitochondrion | 26.29 | 21.79 |
| CDY43526 | Canola | nucleus | 24.82 | 20.7 |
| CDX68587 | Canola | nucleus | 25.06 | 20.44 |
Protein Annotations
| EnsemblPlants:CDX83197 | EnsemblPlantsGene:GSBRNA2T00138736001 | Gene3D:3.40.1090.10 | GO:A0A078D268 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | InterPro:Acyl_Trfase/lysoPLipase | InterPro:IPR002641 | InterPro:PNPLA_dom | PANTHER:PTHR32176 | PANTHER:PTHR32176:SF6 |
| PFAM:PF01734 | PFscan:PS51635 | ProteinID:CDX83197 | ProteinID:CDX83197.1 | SUPFAM:SSF52151 | UniParc:UPI0004EDE254 |
| MapMan:5.7.2.2.3 | : | : | : | : | : |
Description
BnaA03g23090D
Coordinates
chrLK031832:+:361401..364032
Molecular Weight (calculated)
44413.9 Da
IEP (calculated)
6.516
GRAVY (calculated)
-0.229
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MQMESPKSPL QPPTYGNLVT ILSIDGGGIR GIIPATILAF LESELQKLDG NEARLADYFD VVAGTSTGGL VTAMLTAPNK EGRPLLAASE IKEFYLEHCP
101: KIFPQNHFPF SATKNLVKSL TGPKYDGEYL HQLIHAKLGD TRLHQTLTNV VIPTFDIKHL QPTIFSSYGV KKNPLKNATL ADITISTSAA PTYLPAHFFK
201: THDSAGNVKE YNLIDGGVAA NNPALVAIGE VTKEITRGSS DFFPIRPNDY GRFLVISLGT GTRKSEEKFN ANEVAGWGML SWLTHDNSTP LIDAFMQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLNG DAASVDISTV ENLDILAKTG DELLKKPVSR VNLESGCNEN AYEVTNEKAL IKLAGILSKE KMIRDSRSPH
401: KNAPNSK
101: KIFPQNHFPF SATKNLVKSL TGPKYDGEYL HQLIHAKLGD TRLHQTLTNV VIPTFDIKHL QPTIFSSYGV KKNPLKNATL ADITISTSAA PTYLPAHFFK
201: THDSAGNVKE YNLIDGGVAA NNPALVAIGE VTKEITRGSS DFFPIRPNDY GRFLVISLGT GTRKSEEKFN ANEVAGWGML SWLTHDNSTP LIDAFMQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLNG DAASVDISTV ENLDILAKTG DELLKKPVSR VNLESGCNEN AYEVTNEKAL IKLAGILSKE KMIRDSRSPH
401: KNAPNSK
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
Arabidopsis Description
PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.