Factsheet for HORVU4Hr1G050060.10

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 1
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G060260.1
HORVU3Hr1G101170.1
HORVU3Hr1G107330.1
HORVU4Hr1G019140.24
HORVU4Hr1G050060.10
HORVU5Hr1G069130.5
HORVU7Hr1G009930.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26560.1	HORVU3Hr1G107330.1	AT1G34570.1	21798944
AT2G26560.1	HORVU7Hr1G009930.1	AT1G34570.1	21798944
AT2G26560.1	HORVU2Hr1G060260.1	AT2G26560.1	21798944
AT2G26560.1	HORVU3Hr1G101170.1	AT2G26560.1	21798944
AT2G26560.1	HORVU4Hr1G019140.24	AT2G26560.1	21798944
AT2G26560.1	HORVU4Hr1G050060.10	AT2G26560.1	21798944
AT2G26560.1	HORVU5Hr1G069130.5	AT2G26560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G060260.1	Barley	plastid	94.19	88.36
HORVU3Hr1G101170.1	Barley	mitochondrion, plastid	65.12	83.58
HORVU5Hr1G069130.5	Barley	cytosol	90.31	57.53
Os09t0462400-00	Rice	cytosol	74.81	56.43
KXG35787	Sorghum	cytosol	76.36	50.13
Zm00001d005911_P001	Maize	cytosol	75.58	48.51
GSMUA_Achr11P...	Banana	cytosol	60.85	46.45
VIT_18s0001g10870.t01	Wine grape	cytosol	61.63	38.5
VIT_18s0001g10850.t01	Wine grape	cytosol	61.63	38.5
VIT_18s0001g10910.t01	Wine grape	cytosol	61.24	38.26
HORVU6Hr1G027900.2	Barley	cytosol	46.9	35.28
CDX83197	Canola	cytosol	55.43	35.14
Bra000578.1-P	Field mustard	cytosol	55.04	35.06
KRH15338	Soybean	cytosol	55.43	35.05
CDY21469	Canola	cytosol, peroxisome, vacuole	55.04	34.89
KRH15334	Soybean	cytosol	55.04	34.8
VIT_18s0001g10830.t01	Wine grape	mitochondrion, plasma membrane, plastid	61.63	34.57
KRH05709	Soybean	cytosol	53.49	33.82
KRH05708	Soybean	cytosol	48.84	33.42
AT2G26560.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	52.71	33.42
HORVU1Hr1G012140.1	Barley	plastid	48.06	30.39
HORVU4Hr1G075070.7	Barley	plastid	50.0	29.66
HORVU1Hr1G069200.2	Barley	cytosol	46.12	29.31
VIT_18s0001g10930.t01	Wine grape	cytosol	33.72	27.8
HORVU7Hr1G006840.3	Barley	cytosol	31.01	27.59
HORVU7Hr1G036460.1	Barley	plasma membrane	48.45	27.35
HORVU5Hr1G119820.1	Barley	plastid	41.86	27.2
HORVU2Hr1G029000.2	Barley	cytosol	43.41	27.18
HORVU7Hr1G113080.1	Barley	cytosol	48.84	26.98
HORVU3Hr1G004220.4	Barley	cytosol, plastid	50.0	26.88
HORVU5Hr1G119810.5	Barley	cytosol	39.15	26.17
HORVU4Hr1G074970.1	Barley	mitochondrion	41.86	25.59
VIT_18s0001g10900.t01	Wine grape	cytosol	16.67	21.39
HORVU2Hr1G037280.1	Barley	cytosol	18.99	18.99
HORVU4Hr1G019140.24	Barley	cytosol	14.73	17.51
HORVU6Hr1G001990.1	Barley	cytosol	29.46	16.89
HORVU7Hr1G113030.2	Barley	plastid	16.67	16.48
HORVU7Hr1G106600.4	Barley	cytosol	16.28	16.34
HORVU2Hr1G126660.1	Barley	cytosol, nucleus	34.11	15.63
HORVU2Hr1G126570.1	Barley	extracellular	18.22	13.17
HORVU5Hr1G103060.1	Barley	mitochondrion	22.09	12.0
HORVU5Hr1G011400.6	Barley	mitochondrion	20.54	11.83
HORVU0Hr1G008670.3	Barley	cytosol	17.05	10.89
HORVU5Hr1G093250.4	Barley	cytosol	18.99	10.89

Protein Annotations

EnsemblPlants:HORVU4Hr1G050060.10	EnsemblPlantsGene:HORVU4Hr1G050060	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32176	PANTHER:PTHR32176:SF24	PFscan:PS51635
SEG:seg	SUPFAM:SSF52151	UniParc:UPI000B461B59	UniProt:A0A287NZT3	MapMan:5.7.2.2.3	:

Description

No Description!

Coordinates

chrchr4H:+:407121484..407122827

Molecular Weight (calculated)

28367.8 Da

IEP (calculated)

8.227

GRAVY (calculated)

-0.396

Length

258 amino acids

Sequence
(BLAST)

001: PPSPAGLLSG RHHAVRADSG LRPADRRLSP PPPWRARRAE VKKKKKSTMD ALLSDICISM SAAPTYLPAH YFKTEDSHGN TKEFNLIDGG VAANNPALVA
101: IGEVSKQIFK QDSDFFPIKP MDYGRFLVIS LGTGSSKFEE KYDAQKAKSW GVLDWLLSSG STPLVDIFTR ASADMVDIHI ASVFKALHSE QNYLRIQDDT
201: LRGTLSSVDV ATKDNLEKLV NVGELLLKKP VSRANLETGQ MVPTCSETEE TNEEALKR

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.