Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G050060.10 | Barley | plastid | 83.58 | 65.12 |
| HORVU2Hr1G060260.1 | Barley | plastid | 80.6 | 58.91 |
| Os09t0462400-00 | Rice | cytosol | 73.13 | 42.98 |
| HORVU5Hr1G069130.5 | Barley | cytosol | 86.07 | 42.72 |
| KXG35787 | Sorghum | cytosol | 75.62 | 38.68 |
| Zm00001d005911_P001 | Maize | cytosol | 74.63 | 37.31 |
| GSMUA_Achr11P... | Banana | cytosol | 60.7 | 36.09 |
| VIT_18s0001g10870.t01 | Wine grape | cytosol | 61.19 | 29.78 |
| VIT_18s0001g10850.t01 | Wine grape | cytosol | 61.19 | 29.78 |
| VIT_18s0001g10910.t01 | Wine grape | cytosol | 60.7 | 29.54 |
| CDX83197 | Canola | cytosol | 58.21 | 28.75 |
| Bra000578.1-P | Field mustard | cytosol | 57.71 | 28.64 |
| CDY21469 | Canola | cytosol, peroxisome, vacuole | 57.71 | 28.5 |
| AT2G26560.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 55.72 | 27.52 |
| HORVU6Hr1G027900.2 | Barley | cytosol | 46.77 | 27.41 |
| VIT_18s0001g10830.t01 | Wine grape | mitochondrion, plasma membrane, plastid | 61.19 | 26.74 |
| KRH15338 | Soybean | cytosol | 52.74 | 25.98 |
| KRH15334 | Soybean | cytosol | 52.24 | 25.74 |
| HORVU7Hr1G006840.3 | Barley | cytosol | 35.82 | 24.83 |
| KRH05709 | Soybean | cytosol | 49.75 | 24.51 |
| KRH05708 | Soybean | cytosol | 45.27 | 24.14 |
| HORVU1Hr1G012140.1 | Barley | plastid | 48.76 | 24.02 |
| HORVU4Hr1G075070.7 | Barley | plastid | 50.75 | 23.45 |
| HORVU1Hr1G069200.2 | Barley | cytosol | 46.27 | 22.91 |
| HORVU7Hr1G113080.1 | Barley | cytosol | 50.25 | 21.63 |
| HORVU7Hr1G036460.1 | Barley | plasma membrane | 48.76 | 21.44 |
| HORVU2Hr1G029000.2 | Barley | cytosol | 43.78 | 21.36 |
| HORVU3Hr1G004220.4 | Barley | cytosol, plastid | 50.75 | 21.25 |
| HORVU5Hr1G119820.1 | Barley | plastid | 41.29 | 20.91 |
| HORVU4Hr1G074970.1 | Barley | mitochondrion | 42.29 | 20.14 |
| HORVU5Hr1G119810.5 | Barley | cytosol | 38.31 | 19.95 |
| HORVU2Hr1G037280.1 | Barley | cytosol | 23.38 | 18.22 |
| VIT_18s0001g10930.t01 | Wine grape | cytosol | 25.87 | 16.61 |
| HORVU7Hr1G113030.2 | Barley | plastid | 20.9 | 16.09 |
| HORVU4Hr1G019140.24 | Barley | cytosol | 15.42 | 14.29 |
| HORVU7Hr1G106600.4 | Barley | cytosol | 17.41 | 13.62 |
| HORVU2Hr1G126570.1 | Barley | extracellular | 22.89 | 12.89 |
| HORVU6Hr1G001990.1 | Barley | cytosol | 27.86 | 12.44 |
| HORVU2Hr1G126660.1 | Barley | cytosol, nucleus | 34.83 | 12.43 |
| HORVU5Hr1G103060.1 | Barley | mitochondrion | 23.88 | 10.11 |
| HORVU5Hr1G011400.6 | Barley | mitochondrion | 21.89 | 9.82 |
| HORVU0Hr1G008670.3 | Barley | cytosol | 19.4 | 9.65 |
| HORVU5Hr1G093250.4 | Barley | cytosol | 20.9 | 9.33 |
| VIT_18s0001g10900.t01 | Wine grape | cytosol | 5.47 | 5.47 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G101170.1 | EnsemblPlantsGene:HORVU3Hr1G101170 | Gene3D:3.40.1090.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 | GO:GO:0016787 | InterPro:Acyl_Trfase/lysoPLipase |
| InterPro:IPR002641 | InterPro:PNPLA_dom | PANTHER:PTHR32176 | PANTHER:PTHR32176:SF6 | PFscan:PS51635 | SEG:seg |
| SUPFAM:SSF52151 | UniParc:UPI000B487BAF | UniProt:A0A287MI13 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr3H:-:663916230..663917553
Molecular Weight (calculated)
22331.6 Da
IEP (calculated)
10.243
GRAVY (calculated)
-0.434
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: SPSISRRTPL RPPPRRSRRP RPPPRRSKTV SASSVVKKKK KSTMDALLSD ICISMSAAPT YLPAHYFKTE DSHGNTKEFN LIDGGVAANN SALVAIGEVS
101: KQIFKQDSDF FPIKPMDYGR FLVISLGTGS SKFEEKYDAQ KDKSWGVLDW LLSSGSTPLV DIFTRASADM VDIHIASVFK ALYSEQNYLR IQDDTLRGTL
201: S
101: KQIFKQDSDF FPIKPMDYGR FLVISLGTGS SKFEEKYDAQ KDKSWGVLDW LLSSGSTPLV DIFTRASADM VDIHIASVFK ALYSEQNYLR IQDDTLRGTL
201: S
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
Arabidopsis Description
PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.