Factsheet for Bra000578.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
vacuole 3
plastid 1
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000578.1-P
Bra028059.1-P
Bra036754.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26560.1	Bra028059.1-P	AT1G34570.1	21798944
AT2G26560.1	Bra036754.1-P	AT1G34570.1	21798944
AT2G26560.1	Bra000578.1-P	AT2G26560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21469	Canola	cytosol, peroxisome, vacuole	99.01	98.53
CDX83197	Canola	cytosol	99.01	98.53
AT2G26560.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	87.9	87.47
VIT_18s0001g10910.t01	Wine grape	cytosol	68.15	66.83
VIT_18s0001g10850.t01	Wine grape	cytosol	68.15	66.83
KXG35787	Sorghum	cytosol	64.69	66.67
VIT_18s0001g10870.t01	Wine grape	cytosol	67.9	66.59
TraesCS5D01G249800.1	Wheat	cytosol	66.42	66.42
Zm00001d005911_P001	Maize	cytosol	65.68	66.17
HORVU5Hr1G069130.5	Barley	cytosol	65.93	65.93
TraesCS5A01G243200.1	Wheat	cytosol	65.68	65.68
TraesCS5B01G241100.2	Wheat	cytosol	65.68	65.2
Os09t0462400-00	Rice	cytosol	54.57	64.62
GSMUA_Achr11P...	Banana	cytosol	52.35	62.72
VIT_18s0001g10900.t01	Wine grape	cytosol	31.11	62.69
KRH15338	Soybean	cytosol	61.98	61.52
KRH15334	Soybean	cytosol	61.73	61.27
VIT_18s0001g10830.t01	Wine grape	mitochondrion, plasma membrane, plastid	68.15	60.0
KRH05709	Soybean	cytosol	60.25	59.8
KRH05708	Soybean	cytosol	54.57	58.62
HORVU3Hr1G101170.1	Barley	mitochondrion, plastid	28.64	57.71
Bra017799.1-P	Field mustard	cytosol	57.04	56.07
HORVU4Hr1G050060.10	Barley	plastid	35.06	55.04
HORVU4Hr1G019140.24	Barley	cytosol	29.38	54.84
HORVU2Hr1G060260.1	Barley	plastid	36.79	54.18
GSMUA_Achr9P27010_001	Banana	cytosol	57.28	54.08
Bra011732.1-P	Field mustard	cytosol	50.86	53.93
Bra017798.1-P	Field mustard	cytosol	51.36	50.98
Bra011730.1-P	Field mustard	cytosol	51.36	50.98
GSMUA_Achr7P12940_001	Banana	cytosol	59.75	50.84
Bra011731.1-P	Field mustard	cytosol, peroxisome, plastid	50.37	50.37
Bra040428.1-P	Field mustard	cytosol	23.46	24.55
Bra007735.1-P	Field mustard	cytosol	22.47	23.64
Bra005058.1-P	Field mustard	cytosol	27.65	23.0
Bra000125.1-P	Field mustard	cytosol	27.41	22.98
Bra003202.1-P	Field mustard	mitochondrion	26.91	22.9
Bra007119.1-P	Field mustard	mitochondrion	26.67	21.77

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	InterPro:Acyl_Trfase/lysoPLipase	EnsemblPlantsGene:Bra000578	EnsemblPlants:Bra000578.1	EnsemblPlants:Bra000578.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008219	GO:GO:0009056
GO:GO:0009058	GO:GO:0009605	GO:GO:0009607	GO:GO:0009626	GO:GO:0009628	GO:GO:0009987
GO:GO:0016020	GO:GO:0016042	GO:GO:0016298	GO:GO:0016787	GO:GO:0031408	GO:GO:0046686
GO:GO:0051607	GO:GO:0071456	InterPro:IPR002641	UniProt:M4C8Q0	PFAM:PF01734	InterPro:PNPLA_dom
PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF6	SUPFAM:SSF52151	UniParc:UPI0002540130	:

Description

AT2G26560 (E=1e-207) PLP2, PLA IIA, PLA2A | PLA2A (PHOSPHOLIPASE A 2A); lipase/ nutrient reservoir

Coordinates

chrA03:-:11871069..11875707

Molecular Weight (calculated)

44274.7 Da

IEP (calculated)

6.381

GRAVY (calculated)

-0.238

Length

405 amino acids

Sequence
(BLAST)

001: MESPKSPLQP PTYGNLVTIL SIDGGGIRGI IPATILAFLE SELQKLDGNE ARLADYFDVV AGTSTGGLVT AMLTAPNKEG RPLFAASEIK EFYLEHCPKI
101: FPQNHFPFSA TKNLVKSLTG PKYDGEYLHQ LIHAKLGDTR LHQTLTNVVI PTFDIKHLQP TIFSSYEVKK NPLKNATLAD ITISTSAAPT YLPAHFFKTH
201: DSAGNVKEYN LIDGGVAANN PALVAIGEVT KEITRGSSDF FPIRPNDYGR FLVLSLGTGT RKSEEKFNAN EVAGWGMLSW LTHDNSTPLI DAFMQASSDM
301: VDFHLSAVFR ALHSEANYIR IQDDTLNGDA ASVDISTVEN LDILAKTGDE LLKKPVSRVN LESGCNENAY EVTNEKALIK LAGILSKEKM IRESRSPHKN
401: APNSK

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.