Factsheet for Bra007735.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
vacuole 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, vacuole
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003423.1-P
Bra005039.1-P
Bra007547.1-P
Bra012567.1-P
Bra013361.1-P
Bra014481.1-P
Bra017071.1-P
Bra027174.1-P
Bra030034.1-P
Bra032817.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63200.1	Bra030034.1-P	AT1G27300.1	21798944
AT3G63200.1	Bra032817.1-P	AT1G27300.1	21798944
AT3G63200.1	Bra005039.1-P	AT2G39450.1	21798944
AT3G63200.1	Bra017071.1-P	AT2G39450.1	21798944
AT3G63200.1	Bra027174.1-P	AT3G16310.1	21798944
AT3G63200.1	Bra003423.1-P	AT3G60600.1	21798944
AT3G63200.1	Bra007547.1-P	AT3G60600.1	21798944
AT3G63200.1	Bra014481.1-P	AT3G60600.1	21798944
AT3G63200.1	Bra012567.1-P	AT4G19030.1	21798944
AT3G63200.1	Bra013361.1-P	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56455	Canola	cytosol	94.03	98.91
Bra040428.1-P	Field mustard	cytosol	90.91	90.44
AT3G63200.1	Thale cress	cytosol	87.79	88.02
VIT_07s0151g01130.t01	Wine grape	cytosol	74.55	74.55
KRH32021	Soybean	cytosol	71.17	72.11
KRH71425	Soybean	cytosol	70.91	72.03
PGSC0003DMT400051868	Potato	cytosol	68.83	69.37
Solyc09g065240.2.1	Tomato	cytosol	68.57	68.93
PGSC0003DMT400033524	Potato	cytosol	67.53	68.6
KRG95536	Soybean	cytosol	67.53	68.06
KRH67210	Soybean	cytosol	68.31	65.75
Bra003202.1-P	Field mustard	mitochondrion	41.82	33.82
Bra007119.1-P	Field mustard	mitochondrion	43.12	33.47
Bra000125.1-P	Field mustard	cytosol	41.82	33.33
Bra005058.1-P	Field mustard	cytosol	41.3	32.65
Bra011730.1-P	Field mustard	cytosol	24.16	22.79
Bra011731.1-P	Field mustard	cytosol, peroxisome, plastid	23.64	22.47
Bra000578.1-P	Field mustard	cytosol	23.64	22.47
Bra017798.1-P	Field mustard	cytosol	23.64	22.3
Bra011732.1-P	Field mustard	cytosol	21.82	21.99
Bra017799.1-P	Field mustard	cytosol	23.12	21.6

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	InterPro:Acyl_Trfase/lysoPLipase	EnsemblPlantsGene:Bra007735	EnsemblPlants:Bra007735.1	EnsemblPlants:Bra007735.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016042	GO:GO:0016787	InterPro:IPR002641	UniProt:M4CU41	PFAM:PF01734	InterPro:PNPLA_dom
PFscan:PS51635	PANTHER:PTHR32241	PANTHER:PTHR32241:SF5	SUPFAM:SSF52151	UniParc:UPI0002542BA6	SEG:seg

Description

AT3G63200 (E=7e-165) PLP9, PLA IIIB | PLP9 (PATATIN-LIKE PROTEIN 9); nutrient reservoir

Coordinates

chrA09:+:30615500..30616745

Molecular Weight (calculated)

41270.2 Da

IEP (calculated)

7.944

GRAVY (calculated)

-0.159

Length

385 amino acids

Sequence
(BLAST)

001: MDLSKVTLDI FTKLEQKWLS PRKTRILSID GGGTTAIVAG ASILHLEDQI RLQTGDPHAQ ISDFFDIVAG TGIGGILAAL LVADDGSGKP MFTARDTVRF
101: ISEKNSELFE IRHTGVFRRN RRCSAGSMDR ALEAAFRRED GKVLTMKDTC KPLLVPCYDL RSSAPFVFSR AGASESPSFD FELWKVCRAT SATPSLFKPV
201: NVVSVDGKTS CLAVDGGLVM NNPSAAAVTH VLHNKRDFPS VNGVDDLLVL SLGNGSSSSP GGKLRRNGDC STSCVVDIVT DGVSDTVDQM LGNAFCWNRT
301: DYVRIQVSGL TRGGEGIVGP RKTAEELLKE RGVETAPFGG KRLLSETNGE RIESFVQRLV ASGKSTSLPP SPCKESAVNP LADGR

Best Arabidopsis Sequence Match ( AT3G63200.1 )
(BLAST)

001: MEMDLSKVTL DIFTKLEQKW LSHCDSSRKT RILSIDGGGT TGIVAAASIL HLEHQIRLQT GDPHAHISDF FDIVAGTGIG GILAALLVAD DGSGRPMFTA
101: RDAVKFVAEK NSELFEIRYT GVFRRNKRYS GKSMERVLET AFRREDGKVL TMKDTCKPLL VPCYDLKTSA PFVFSRAGAS ESPSFDFELW KVCRATSATP
201: SLFKPFSVVS VDGKTSCSAV DGGLVMNNPT AAAVTHVLHN KRDFPSVNGV DDLLVLSLGN GPSTMSSSPG RKLRRNGDYS TSSVVDIVVD GVSDTVDQML
301: GNAFCWNRTD YVRIQANGLT SGGAEELLKE RGVETAPFGV KRILTESNGE RIEGFVQRLV ASGKSSLPPS PCKESAVNPL ADGR

Arabidopsis Description

PLP9Probable inactive patatin-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZQ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.