Factsheet for Bra005039.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
vacuole 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra022748.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39450.1	Bra022748.1-P	AT5G51010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20439	Canola	endoplasmic reticulum, extracellular	33.52	99.19
CDY20436	Canola	endoplasmic reticulum, extracellular	33.52	99.19
CDY53587	Canola	cytosol, nucleus, peroxisome	100.0	93.09
AT2G39450.1	Thale cress	cytosol, peroxisome, plasma membrane	96.15	88.83
Bra017071.1-P	Field mustard	nucleus	95.88	88.58
KRH70520	Soybean	cytosol	82.97	76.26
KRH01581	Soybean	cytosol	82.97	76.26
VIT_13s0019g00020.t01	Wine grape	cytosol, peroxisome, plasma membrane	82.14	74.94
Solyc05g054730.2.1	Tomato	cytosol, peroxisome, plasma membrane	82.42	74.81
PGSC0003DMT400060460	Potato	cytosol, peroxisome, plasma membrane	81.87	74.31
CDY20438	Canola	cytosol	45.6	71.86
GSMUA_Achr9P03180_001	Banana	cytosol, peroxisome, plasma membrane	77.47	71.39
HORVU3Hr1G086970.1	Barley	cytosol, peroxisome, plasma membrane	76.92	70.18
TraesCS3B01G388400.1	Wheat	cytosol, peroxisome, plasma membrane	77.75	70.05
TraesCS3A01G355500.2	Wheat	cytosol, peroxisome, plasma membrane	77.47	69.8
TraesCS3D01G349500.1	Wheat	cytosol, peroxisome, plasma membrane	77.2	69.55
HORVU1Hr1G071930.2	Barley	cytosol	76.92	69.31
TraesCS1B01G296500.1	Wheat	cytosol, peroxisome, plasma membrane	77.47	69.12
TraesCS1D01G286000.1	Wheat	cytosol, peroxisome, plasma membrane	77.2	69.04
EES03850	Sorghum	cytosol, peroxisome, plasma membrane	77.47	68.95
TraesCS1A01G287100.1	Wheat	cytosol, peroxisome, plasma membrane	76.92	68.8
Os01t0837800-01	Rice	cytosol	77.75	68.19
Zm00001d042939_P002	Maize	cytosol, peroxisome, plasma membrane	76.65	66.27
Os05t0461900-00	Rice	cytosol	67.31	65.16
CDY20435	Canola	cytosol, mitochondrion, nucleus, peroxisome	45.6	61.48
GSMUA_Achr5P29180_001	Banana	plasma membrane	75.82	61.06
Bra026067.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	56.04	51.0
Bra026723.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	56.04	50.87
Bra007377.1-P	Field mustard	cytosol, peroxisome, plasma membrane	48.35	42.93
Bra014588.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.7	41.98
Bra003316.1-P	Field mustard	cytosol, peroxisome, plasma membrane	47.25	41.95
Bra035123.1-P	Field mustard	cytosol, peroxisome, plasma membrane	56.87	34.33

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.2	Gene3D:3.30.70.1350	EnsemblPlantsGene:Bra005039	EnsemblPlants:Bra005039.1	EnsemblPlants:Bra005039.1-P
InterPro:Cation_efflux	InterPro:Cation_efflux_CTD	InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008324	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	GO:GO:0098655	InterPro:IPR027469	InterPro:IPR036837	UniProt:M4CLF2
PFAM:PF01545	PFAM:PF16916	PANTHER:PTHR43840	PANTHER:PTHR43840:SF5	SUPFAM:SSF160240	SUPFAM:SSF161111
TMHMM:TMhelix	UniParc:UPI00025474CD	SEG:seg	:	:	:

Description

AT2G39450 (E=1e-090) MTP11, ATMTP11 | MTP11; cation transmembrane transporter/ manganese ion transmembrane transporter/ manganese:hydrogen antiporter

Coordinates

chrA05:+:3107674..3109792

Molecular Weight (calculated)

41460.8 Da

IEP (calculated)

5.013

GRAVY (calculated)

-0.056

Length

364 amino acids

Sequence
(BLAST)

001: MVRPDGEEGI LLLEFHGNGD RSWQLNFDDF QVSPEHKEKK SPSKLHNCLG CLGPEDNVAD YYQQQVEMLE GFTEMDELAE RGFVPGMSKE EQDNLAKSET
101: LAIRISNIAN MVLFAAKVYA SVTSGSLAIV ASTLDSLLDL LSGFILWFTA FSMQTPNPYQ YPIGKKRMQP LHKEFSLTKE QESWVVGIML SVTLVKLLLV
201: LYCRSFSNEI VKAYAQDHFF DVITNIIGLI AVILANYFDN WMDPVGAIIL ALYTIRTWSM TVLENVNSLV GKTATPEYLQ KLTYLCWNHH KAIRHIDTVR
301: AYTFGSHYFV EVDIVLPADM PLQVAHDIGE SLQEKLELLQ EIERAFVHLD YEYTHKPEHA RSHC

Best Arabidopsis Sequence Match ( AT2G39450.1 )
(BLAST)

001: MVEPASPDSD EGISLLEFHG NGDRSWQLNF DDFQVSPEHK EKKSPSKLHN CLGCLGPEDN VADYYQQQVE MLEGFTEMDE LAERGFVPGM SKEEQDNLAK
101: SETLAIRISN IANMLLFAAK VYASVTSGSL AIIASTLDSL LDLLSGFILW FTAFSMQTPN PYQYPIGKKR MQPLGILVFA SVMATLGLQI ILESLRTMLS
201: SHKEFNLTKE QESWVVGIML SVTLVKLLLV LYCRSFTNEI VKAYAQDHFF DVITNIIGLI AVILANYIDY WIDPVGAIIL ALYTIRTWSM TVLENVNSLV
301: GKSARPEYLQ KLTYLCWNHH KAIRHIDTVR AYTFGSHYFV EVDIVLPADM PLQVAHDIGE SLQEKLELLE EIERAFVHLD YEYTHKPEHA RSHC

Arabidopsis Description

MTP11MTP11 [Source:UniProtKB/TrEMBL;Acc:A0A178VPD8]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.