Factsheet for Bra017071.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra022748.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39450.1	Bra022748.1-P	AT5G51010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07013	Canola	cytosol	98.73	98.23
Bra005039.1-P	Field mustard	cytosol, nucleus, peroxisome	88.58	95.88
AT2G39450.1	Thale cress	cytosol, peroxisome, plasma membrane	93.4	93.4
KRH70520	Soybean	cytosol	81.22	80.81
KRH01581	Soybean	cytosol	81.22	80.81
VIT_13s0019g00020.t01	Wine grape	cytosol, peroxisome, plasma membrane	79.7	78.7
Solyc05g054730.2.1	Tomato	cytosol, peroxisome, plasma membrane	79.7	78.3
PGSC0003DMT400060460	Potato	cytosol, peroxisome, plasma membrane	79.19	77.81
GSMUA_Achr9P03180_001	Banana	cytosol, peroxisome, plasma membrane	77.41	77.22
HORVU3Hr1G086970.1	Barley	cytosol, peroxisome, plasma membrane	76.4	75.44
TraesCS3B01G388400.1	Wheat	cytosol, peroxisome, plasma membrane	77.16	75.25
TraesCS3A01G355500.2	Wheat	cytosol, peroxisome, plasma membrane	76.9	75.0
HORVU1Hr1G071930.2	Barley	cytosol	76.9	75.0
TraesCS3D01G349500.1	Wheat	cytosol, peroxisome, plasma membrane	76.65	74.75
TraesCS1B01G296500.1	Wheat	cytosol, peroxisome, plasma membrane	77.16	74.51
TraesCS1D01G286000.1	Wheat	cytosol, peroxisome, plasma membrane	76.65	74.2
TraesCS1A01G287100.1	Wheat	cytosol, peroxisome, plasma membrane	76.65	74.2
EES03850	Sorghum	cytosol, peroxisome, plasma membrane	76.9	74.08
Os01t0837800-01	Rice	cytosol	76.9	73.01
Zm00001d042939_P002	Maize	cytosol, peroxisome, plasma membrane	76.65	71.73
Os05t0461900-00	Rice	cytosol	67.26	70.48
GSMUA_Achr5P29180_001	Banana	plasma membrane	75.89	66.15
Bra026067.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	57.36	56.5
Bra026723.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	56.85	55.86
Bra007377.1-P	Field mustard	cytosol, peroxisome, plasma membrane	47.46	45.61
Bra014588.1-P	Field mustard	cytosol, peroxisome, plasma membrane	45.69	44.44
Bra003316.1-P	Field mustard	cytosol, peroxisome, plasma membrane	45.69	43.9
Bra035123.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.12	37.98

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.2	Gene3D:3.30.70.1350	EnsemblPlantsGene:Bra017071	EnsemblPlants:Bra017071.1	EnsemblPlants:Bra017071.1-P
InterPro:Cation_efflux	InterPro:Cation_efflux_CTD	InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf	ncoils:Coil	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008324
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0098655	InterPro:IPR027469	InterPro:IPR036837
UniProt:M4DKP0	PFAM:PF01545	PFAM:PF16916	PANTHER:PTHR43840	PANTHER:PTHR43840:SF5	SUPFAM:SSF160240
SUPFAM:SSF161111	TIGRFAMs:TIGR01297	TMHMM:TMhelix	UniParc:UPI0002544BA9	SEG:seg	:

Description

AT2G39450 (E=2e-189) MTP11, ATMTP11 | MTP11; cation transmembrane transporter/ manganese ion transmembrane transporter/ manganese:hydrogen antiporter

Coordinates

chrA04:-:16794639..16796254

Molecular Weight (calculated)

44595.7 Da

IEP (calculated)

4.860

GRAVY (calculated)

0.005

Length

394 amino acids

Sequence
(BLAST)

001: MTRPATRDGD EEISLLVFNG DGDRSWQLNF DDFQVSPEHK KKKSPSKLHN CLGCLGPEDN VADYYQQQVE MLEGFTEMDE LAERGFVPGM SKEEQDNLAK
101: SETLAIRISN IANMVLFAAK VYASVTSGSL AIVASTLDSL LDLLSGFILW FTAFSMQTPN PYQYPIGKKR MQPLGILVFA SVMATLGLQI ILESLRTMVS
201: SQKEFSLTKE QESWVVGIML SVTLVKLLLV LYCRSFSNEI VKAYAQDHFF DVITNIIGLI AVILANYFDN WMDPVGAIIL ALYTIRTWSM TVLENVNSLV
301: GKSATPEYLQ KLTYLCWNHH REIRHIDTVR AYTFGSHYFV EVDIVLPADM PLQVAHDIGE ALQEKLEQLQ EIERAFVHLD YEYTHKPEHA SSHC

Best Arabidopsis Sequence Match ( AT2G39450.1 )
(BLAST)

001: MVEPASPDSD EGISLLEFHG NGDRSWQLNF DDFQVSPEHK EKKSPSKLHN CLGCLGPEDN VADYYQQQVE MLEGFTEMDE LAERGFVPGM SKEEQDNLAK
101: SETLAIRISN IANMLLFAAK VYASVTSGSL AIIASTLDSL LDLLSGFILW FTAFSMQTPN PYQYPIGKKR MQPLGILVFA SVMATLGLQI ILESLRTMLS
201: SHKEFNLTKE QESWVVGIML SVTLVKLLLV LYCRSFTNEI VKAYAQDHFF DVITNIIGLI AVILANYIDY WIDPVGAIIL ALYTIRTWSM TVLENVNSLV
301: GKSARPEYLQ KLTYLCWNHH KAIRHIDTVR AYTFGSHYFV EVDIVLPADM PLQVAHDIGE SLQEKLELLE EIERAFVHLD YEYTHKPEHA RSHC

Arabidopsis Description

MTP11MTP11 [Source:UniProtKB/TrEMBL;Acc:A0A178VPD8]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.