CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
vacuole 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES09846

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39450.1	EES09846	AT5G51010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042939_P002	Maize	cytosol, peroxisome, plasma membrane	96.09	93.35
Os01t0837800-01	Rice	cytosol	91.69	90.36
TraesCS3B01G388400.1	Wheat	cytosol, peroxisome, plasma membrane	88.75	89.85
HORVU3Hr1G086970.1	Barley	cytosol, peroxisome, plasma membrane	87.04	89.22
TraesCS3D01G349500.1	Wheat	cytosol, peroxisome, plasma membrane	87.78	88.86
TraesCS3A01G355500.2	Wheat	cytosol, peroxisome, plasma membrane	87.53	88.61
GSMUA_Achr9P03180_001	Banana	cytosol, peroxisome, plasma membrane	80.68	83.54
CDY20436	Canola	endoplasmic reticulum, extracellular	24.94	82.93
CDY20439	Canola	endoplasmic reticulum, extracellular	24.94	82.93
KRH70520	Soybean	cytosol	75.79	78.28
KRH01581	Soybean	cytosol	75.79	78.28
CDY53587	Canola	cytosol, nucleus, peroxisome	74.33	77.75
Bra005039.1-P	Field mustard	cytosol, nucleus, peroxisome	68.95	77.47
AT2G39450.1	Thale cress	cytosol, peroxisome, plasma membrane	74.57	77.41
CDX93260	Canola	cytosol	74.82	77.27
Solyc05g054730.2.1	Tomato	cytosol, peroxisome, plasma membrane	75.55	77.06
Bra017071.1-P	Field mustard	nucleus	74.08	76.9
PGSC0003DMT400060460	Potato	cytosol, peroxisome, plasma membrane	75.31	76.81
CDY07013	Canola	cytosol	74.33	76.77
VIT_13s0019g00020.t01	Wine grape	cytosol, peroxisome, plasma membrane	74.57	76.44
GSMUA_Achr5P29180_001	Banana	plasma membrane	78.73	71.24
CDY20438	Canola	cytosol	38.14	67.53
CDY20435	Canola	cytosol, mitochondrion, nucleus, peroxisome	38.63	58.52
KXG31976	Sorghum	cytosol	54.77	56.71
EER92593	Sorghum	cytosol, peroxisome, plasma membrane	46.94	48.12
KXG31199	Sorghum	peroxisome	46.45	43.78

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.2	Gene3D:3.30.70.1350	EntrezGene:8057771	UniProt:C5XP37	InterPro:Cation_efflux
InterPro:Cation_efflux_CTD	InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf	EnsemblPlants:EES03850	ProteinID:EES03850	ProteinID:EES03850.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005384	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005768	GO:GO:0005770	GO:GO:0005794	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0008324	GO:GO:0009987	GO:GO:0010042	GO:GO:0010486	GO:GO:0016020
GO:GO:0016021	GO:GO:0019725	GO:GO:0030026	GO:GO:0046688	GO:GO:0055085	GO:GO:0071421
GO:GO:0098655	InterPro:IPR027469	InterPro:IPR036837	PFAM:PF01545	PFAM:PF16916	PANTHER:PTHR43840
PANTHER:PTHR43840:SF14	EnsemblPlantsGene:SORBI_3003G349200	SUPFAM:SSF160240	SUPFAM:SSF161111	unigene:Sbi.8207	TIGRFAMs:TIGR01297
TMHMM:TMhelix	UniParc:UPI0001A85883	RefSeq:XP_002458730.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:66914666..66920611

Molecular Weight (calculated)

45557.7 Da

IEP (calculated)

4.846

GRAVY (calculated)

0.040

Length

409 amino acids

Sequence
(BLAST)

001: MASAAAEANG GEGEELLLLS AAEAGRGGGA TAEAEESWRL NFEGFRPPEA HQERPPTGPL HHCLGVLAQG PEDVVAEYYQ QQVEMLEGFS EMDTLTDRGF
101: LPGMSKEERE KVARSETLAI RLSNIANMVL FAAKVYASVR SGSLAIIAST LDSLLDLLSG FILWFTAFSM QTPNPYRYPI GKKRMQPLGI LVFASVMATL
201: GLQIILESIR SLASDGDEFS LTSDQEKWLV DIMLSVTLVK LALVIYCRSF TNEIVKAYAQ DHFFDVITNI IGLVAALLAN YIEGWIDPLG AIVLAIYTIR
301: TWSMTVLENV HSLVGQSASP EYLQKLTYLC WNHHKAVRHI DTVRAYTFGS HYFVEVDIVL PSNMPLREAH DIGEALQEKL ERLPEIERAF VHLDYEFTHR
401: PEHALSHEK

Best Arabidopsis Sequence Match ( AT2G39450.1 )
(BLAST)

001: MVEPASPDSD EGISLLEFHG NGDRSWQLNF DDFQVSPEHK EKKSPSKLHN CLGCLGPEDN VADYYQQQVE MLEGFTEMDE LAERGFVPGM SKEEQDNLAK
101: SETLAIRISN IANMLLFAAK VYASVTSGSL AIIASTLDSL LDLLSGFILW FTAFSMQTPN PYQYPIGKKR MQPLGILVFA SVMATLGLQI ILESLRTMLS
201: SHKEFNLTKE QESWVVGIML SVTLVKLLLV LYCRSFTNEI VKAYAQDHFF DVITNIIGLI AVILANYIDY WIDPVGAIIL ALYTIRTWSM TVLENVNSLV
301: GKSARPEYLQ KLTYLCWNHH KAIRHIDTVR AYTFGSHYFV EVDIVLPADM PLQVAHDIGE SLQEKLELLE EIERAFVHLD YEYTHKPEHA RSHC

Arabidopsis Description

MTP11MTP11 [Source:UniProtKB/TrEMBL;Acc:A0A178VPD8]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.