CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
vacuole 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028344_P002	Maize	cytosol, peroxisome, plasma membrane	97.74	97.01
Os03t0226400-01	Rice	vacuole	91.98	92.44
TraesCS4D01G234400.1	Wheat	cytosol, peroxisome, plasma membrane	90.98	90.75
TraesCS4B01G233300.1	Wheat	cytosol, peroxisome, plasma membrane	90.98	90.75
TraesCS4A01G077100.1	Wheat	cytosol, peroxisome, plasma membrane	90.98	90.52
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion	21.05	86.6
KRG98100	Soybean	plasma membrane	61.4	83.33
GSMUA_Achr11P...	Banana	golgi, plasma membrane	47.62	80.85
GSMUA_Achr6P11470_001	Banana	cytosol	81.2	79.61
Solyc03g052990.2.1	Tomato	cytosol, golgi, peroxisome	72.43	78.11
HORVU4Hr1G065110.3	Barley	cytosol, peroxisome	91.23	77.61
PGSC0003DMT400002845	Potato	cytosol	74.69	75.44
VIT_06s0004g01110.t01	Wine grape	plastid	76.69	73.56
PGSC0003DMT400081988	Potato	cytosol	73.93	72.84
Solyc01g006150.2.1	Tomato	cytosol	73.43	72.35
KRH67095	Soybean	cytosol	71.68	71.86
VIT_08s0007g06760.t01	Wine grape	cytosol, peroxisome, plasma membrane	72.18	71.46
KRG95425	Soybean	endoplasmic reticulum, golgi, plasma membrane	63.41	70.87
Solyc12g100300.1.1	Tomato	cytosol	69.92	70.81
PGSC0003DMT400010945	Potato	cytosol	72.43	69.81
KRH17220	Soybean	cytosol, peroxisome, plasma membrane	66.67	67.86
CDY06055	Canola	cytosol, peroxisome, plasma membrane	69.17	67.32
CDX71976	Canola	cytosol, peroxisome, plasma membrane	69.17	67.32
Bra007377.1-P	Field mustard	cytosol, peroxisome, plasma membrane	69.17	67.32
CDX88969	Canola	cytosol, peroxisome, plasma membrane	67.92	66.91
Bra014588.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.92	66.91
AT3G58060.1	Thale cress	cytosol, peroxisome, plasma membrane	68.92	66.91
CDY67929	Canola	cytosol	67.42	66.42
CDY57242	Canola	cytosol	67.17	65.37
Bra003316.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.67	64.88
CDY56242	Canola	cytosol, peroxisome, plasma membrane	66.42	64.63
KXG31199	Sorghum	peroxisome	69.17	63.59
KRH72855	Soybean	cytosol, endoplasmic reticulum, peroxisome	62.66	58.69
EES03850	Sorghum	cytosol, peroxisome, plasma membrane	48.12	46.94
KXG31976	Sorghum	cytosol	46.12	46.58

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.2	Gene3D:3.30.70.1350	EntrezGene:8056839	UniProt:C5WRP0	InterPro:Cation_efflux
InterPro:Cation_efflux_CTD	InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf	EnsemblPlants:EER92593	ProteinID:EER92593	ProteinID:EER92593.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005384	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008324
GO:GO:0009705	GO:GO:0016020	GO:GO:0016021	GO:GO:0035618	GO:GO:0055085	GO:GO:0098655
InterPro:IPR027469	InterPro:IPR036837	PFAM:PF01545	PFAM:PF16916	PANTHER:PTHR43840	PANTHER:PTHR43840:SF3
EnsemblPlantsGene:SORBI_3001G445000	SUPFAM:SSF160240	SUPFAM:SSF161111	TIGRFAMs:TIGR01297	TMHMM:TMhelix	UniParc:UPI0001A82795
RefSeq:XP_002465595.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:72179876..72184128

Molecular Weight (calculated)

44835.0 Da

IEP (calculated)

5.084

GRAVY (calculated)

0.027

Length

399 amino acids

Sequence
(BLAST)

001: MDAENDDARA PLLAAGPGRR RNSVASMRGE FVSRLPKKVL DAVDPERPSH VDFSRSKGLR EGEREYYEKQ FATLRSFEEV DSLEESNEIN EDDELAEQIQ
101: SEFSMKISNY ANIVLLALKV YATIKSGSIA IAASTLDSLL DLMAGGILWF THLSMKSINV YKYPIGKLRV QPVGIIIFAA VMATLGFQVF IQAVEKLIVN
201: EAPDKLNQVQ LLWLYSIMIF ATVVKLALWL YCRTSGNKIV RAYAKDHYFD VVTNVVGLAA AVLGDRFYWW IDPIGAIALA VYTISNWSGT VWENAVSLVG
301: ESAPPEMLQK LTYLAIRHHP QIKRVDTVRA YTFGVLYFVE VDIELPEDLP LKEAHAIGES LQIKIEELPE VERAFVHLDF ECDHKPEHSI LSKLPSSQP

Best Arabidopsis Sequence Match ( AT3G58060.1 )
(BLAST)

001: MEVNYCPETP LLSSNDHEAI DHKPKLTGMV SSMKSNFFAD LPQKLRSKID PENPLHLDVS KAAGLKEDEK EYYERQLATL KSFEEVESFL ARSDEYTIDE
101: KEEEEDRAER AAQELAMQIS NWANIFLLAL KIYATVKSGS IAIAASTLDS LLDLMAGGIL WFTHLSMKNV NIYKYPIGKL RVQPVGIIIF AAVMATLGFQ
201: VLLVAAEQLI SNEPSEKMNH VQLIWLYSIM LSATAIKLVL WIYCKSSRNH IVRAYAKDHH FDVVTNVLGL VAAVLANAFY WWLDPTGAIL LAIYTIVNWS
301: GTVMENAVSL IGQSAPPEVL QKLTYLVMRQ GGDNIKHVDT VRAYTFGVLY FVEVDIELPE DLPLKEAHAI GESLQIKLEE LPEVERAFVH LDFECHHKPE
401: HSVLSTIPND L

Arabidopsis Description

MTPC3Cation efflux family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VEZ3]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.