Factsheet for VIT_08s0007g06760.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
vacuole 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g052990.2.1	Tomato	cytosol, golgi, peroxisome	72.46	78.92
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion	18.86	78.35
PGSC0003DMT400002845	Potato	cytosol	75.19	76.71
GSMUA_Achr11P...	Banana	golgi, plasma membrane	43.67	74.89
Os03t0226400-01	Rice	vacuole	71.71	72.8
GSMUA_Achr6P11470_001	Banana	cytosol	73.45	72.73
KRH67095	Soybean	cytosol	71.71	72.61
EER92593	Sorghum	cytosol, peroxisome, plasma membrane	71.46	72.18
Os02t0775100-01	Rice	plasma membrane	36.48	72.06
TraesCS4D01G234400.1	Wheat	cytosol, peroxisome, plasma membrane	71.22	71.75
TraesCS4B01G233300.1	Wheat	cytosol, peroxisome, plasma membrane	71.22	71.75
TraesCS4A01G077100.1	Wheat	cytosol, peroxisome, plasma membrane	71.22	71.57
Zm00001d028344_P002	Maize	cytosol, peroxisome, plasma membrane	70.72	70.9
VIT_06s0004g01110.t01	Wine grape	plastid	72.7	70.43
KRG95425	Soybean	endoplasmic reticulum, golgi, plasma membrane	61.54	69.47
TraesCS6A01G322500.1	Wheat	cytosol	66.0	64.88
TraesCS6B01G353300.1	Wheat	cytosol	66.0	64.88
HORVU4Hr1G065110.3	Barley	cytosol, peroxisome	71.96	61.83
KXG31199	Sorghum	peroxisome	66.5	61.75
TraesCS6D01G302400.1	Wheat	cytosol	65.51	58.67
Zm00001d018242_P001	Maize	cytosol	65.51	58.28
GSMUA_Achr10P...	Banana	cytosol	23.57	55.23
HORVU6Hr1G078910.2	Barley	cytosol	57.32	54.1
VIT_18s0041g00090.t01	Wine grape	peroxisome	47.39	48.72
VIT_13s0019g00020.t01	Wine grape	cytosol, peroxisome, plasma membrane	47.64	48.12
GSMUA_Achr11P...	Banana	cytosol	31.76	47.06
VIT_19s0085g00650.t01	Wine grape	cytosol, peroxisome, plasma membrane	45.91	46.25

Protein Annotations

Gene3D:1.20.1510.10	EntrezGene:100262328	wikigene:100262328	MapMan:24.2.9.2.2	Gene3D:3.30.70.1350	EMBL:AM475325
ProteinID:CAN83706	ProteinID:CAN83706.1	ProteinID:CBI29996	ProteinID:CBI29996.3	InterPro:Cation_efflux	InterPro:Cation_efflux_CTD
InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf	UniProt:D7TIC0	EMBL:FN595991	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008324	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	GO:GO:0098655	InterPro:IPR027469	InterPro:IPR036837	EntrezGene:LOC100262328
wikigene:LOC100262328	PFAM:PF01545	PFAM:PF16916	PANTHER:PTHR43840	PANTHER:PTHR43840:SF3	SUPFAM:SSF160240
SUPFAM:SSF161111	TIGRFAMs:TIGR01297	TMHMM:TMhelix	UniParc:UPI00015CA371	ArrayExpress:VIT_08s0007g06760	EnsemblPlantsGene:VIT_08s0007g06760
EnsemblPlants:VIT_08s0007g06760.t01	unigene:Vvi.2030	RefSeq:XP_002275885	RefSeq:XP_002275885.1	SEG:seg	:

Description

No Description!

Coordinates

chr8:+:20420758..20424824

Molecular Weight (calculated)

45629.1 Da

IEP (calculated)

6.301

GRAVY (calculated)

-0.040

Length

403 amino acids

Sequence
(BLAST)

001: MDPVKTPLLS TKGEKPNQHE RIRGRDSVTA LKRDFFSQLP EKIRSQLDPE TPFELDLSKT NGLVEGEREY YEKQFATLRS FEEVDSLASS HVTSEEQDRE
101: QQTQHERAMK TSNWANIFLL VFKIYATVRS GSLAIAASTL DSLLDLLAGG ILWFAHLSMK NINIYKYPIG KLRVQPVGII VFAAVMATLG FLVLIQAVEE
201: LIKNEPSEKM TSEKLVWLYA IMLTATVVKL ALWFYCRSSG NKIVRAYAKD HYFDVITNIV GLIAAVLGDK FFWWIDPVGA IILAVYTISN WSRTVLDNAV
301: SLVGQSASPE VLQKLTYLVI RHDPKIKRVD TVRAYTFGAL HFVEVDIELP EDLPLKEAHA IGESLQIKIE ELLEVERAFV HLDFECDHKP EHSVPSKIPN
401: SPR

Best Arabidopsis Sequence Match ( AT3G58060.1 )
(BLAST)

001: MEVNYCPETP LLSSNDHEAI DHKPKLTGMV SSMKSNFFAD LPQKLRSKID PENPLHLDVS KAAGLKEDEK EYYERQLATL KSFEEVESFL ARSDEYTIDE
101: KEEEEDRAER AAQELAMQIS NWANIFLLAL KIYATVKSGS IAIAASTLDS LLDLMAGGIL WFTHLSMKNV NIYKYPIGKL RVQPVGIIIF AAVMATLGFQ
201: VLLVAAEQLI SNEPSEKMNH VQLIWLYSIM LSATAIKLVL WIYCKSSRNH IVRAYAKDHH FDVVTNVLGL VAAVLANAFY WWLDPTGAIL LAIYTIVNWS
301: GTVMENAVSL IGQSAPPEVL QKLTYLVMRQ GGDNIKHVDT VRAYTFGVLY FVEVDIELPE DLPLKEAHAI GESLQIKLEE LPEVERAFVH LDFECHHKPE
401: HSVLSTIPND L

Arabidopsis Description

MTPC3Cation efflux family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VEZ3]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.