Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G322500.1 | Wheat | cytosol | 90.0 | 98.78 |
| TraesCS6B01G353300.1 | Wheat | cytosol | 90.0 | 98.78 |
| Os02t0775100-01 | Rice | plasma membrane | 38.0 | 83.82 |
| HORVU6Hr1G078910.2 | Barley | cytosol | 77.56 | 81.73 |
| KXG31199 | Sorghum | peroxisome | 76.22 | 79.03 |
| Zm00001d018242_P001 | Maize | cytosol | 76.67 | 76.16 |
| KRG98100 | Soybean | plasma membrane | 49.33 | 75.51 |
| Solyc03g052990.2.1 | Tomato | cytosol, golgi, peroxisome | 57.33 | 69.73 |
| TraesCS4D01G234400.1 | Wheat | cytosol, peroxisome, plasma membrane | 60.44 | 68.0 |
| PGSC0003DMT400002845 | Potato | cytosol | 59.11 | 67.34 |
| Solyc12g100300.1.1 | Tomato | cytosol | 58.22 | 66.5 |
| PGSC0003DMT400081988 | Potato | cytosol | 59.78 | 66.42 |
| Solyc01g006150.2.1 | Tomato | cytosol | 59.56 | 66.17 |
| VIT_08s0007g06760.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 58.67 | 65.51 |
| PGSC0003DMT400010945 | Potato | cytosol | 60.22 | 65.46 |
| VIT_06s0004g01110.t01 | Wine grape | plastid | 60.44 | 65.38 |
| KRH67095 | Soybean | cytosol | 57.11 | 64.57 |
| KRG95425 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 50.22 | 63.31 |
| CDY06055 | Canola | cytosol, peroxisome, plasma membrane | 56.67 | 62.2 |
| CDX71976 | Canola | cytosol, peroxisome, plasma membrane | 56.67 | 62.2 |
| Bra007377.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 56.67 | 62.2 |
| AT3G58060.1 | Thale cress | cytosol, peroxisome, plasma membrane | 56.67 | 62.04 |
| KRH17220 | Soybean | cytosol, peroxisome, plasma membrane | 54.0 | 61.99 |
| CDX88969 | Canola | cytosol, peroxisome, plasma membrane | 54.89 | 60.99 |
| Bra014588.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 54.89 | 60.99 |
| CDY67929 | Canola | cytosol | 54.44 | 60.49 |
| Bra003316.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 54.89 | 60.24 |
| CDY57242 | Canola | cytosol | 54.89 | 60.24 |
| CDY56242 | Canola | cytosol, peroxisome, plasma membrane | 54.89 | 60.24 |
| KRH72855 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 50.22 | 53.05 |
| GSMUA_Achr10P... | Banana | cytosol | 20.0 | 52.33 |
| TraesCS1D01G286000.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.67 | 47.17 |
| TraesCS3D01G038000.3 | Wheat | cytosol | 40.44 | 46.43 |
| GSMUA_Achr11P... | Banana | cytosol | 28.0 | 46.32 |
| TraesCS3D01G349500.1 | Wheat | cytosol, peroxisome, plasma membrane | 41.56 | 46.29 |
Protein Annotations
| Gene3D:1.20.1510.10 | MapMan:24.2.9.2.2 | InterPro:Cation_efflux | InterPro:Cation_efflux_CTD_sf | InterPro:Cation_efflux_TMD_sf | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0008324 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR027469 | InterPro:IPR036837 | PFAM:PF01545 |
| PANTHER:PTHR43840 | PANTHER:PTHR43840:SF7 | SUPFAM:SSF160240 | SUPFAM:SSF161111 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6D01G302400 |
| EnsemblPlants:TraesCS6D01G302400.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6D:-:411666439..411668462
Molecular Weight (calculated)
50432.6 Da
IEP (calculated)
4.968
GRAVY (calculated)
-0.048
Length
450 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGDDRSAPL LANGAGRPSL RRRDSARSLR SSFLRRLPDK MRTELDPERG ADVDVARVKD LSQGEREYYR KQLAALKTFE EVEALCMPGE FGSDDDGDPD
101: ADDADDEEQK QSELAMKISN YANIVLLAFK VIDWLNCATE HAKSIALTSD SDSFGLQVYA TIRTGSMAIA ASTLDSLLDL MAGGILWFTH LSMKKVNIYK
201: YPIGKLRVQP VGIIVFAAIM ATLGFQVLVQ AIEQLVENEP GDKLTSEQLI WLYSIMLSAT AVKLALWFYC RSSGNSIVRA YAKDHYFDVI TNVVGLVAAV
301: LGDRFLWWID PAGAVLLAVY TIANWSGTVL EQAVSLVGRS APPEMLQMLT YLAMKHDARV QRVDTVRAYS FGALYFVEFM EYILLLRVWH QVDIVLSEDM
401: RLREAHAIGE SLQERIEKLP EVERAFVHAD FETTHKPEHT VRSRLPATEP
101: ADDADDEEQK QSELAMKISN YANIVLLAFK VIDWLNCATE HAKSIALTSD SDSFGLQVYA TIRTGSMAIA ASTLDSLLDL MAGGILWFTH LSMKKVNIYK
201: YPIGKLRVQP VGIIVFAAIM ATLGFQVLVQ AIEQLVENEP GDKLTSEQLI WLYSIMLSAT AVKLALWFYC RSSGNSIVRA YAKDHYFDVI TNVVGLVAAV
301: LGDRFLWWID PAGAVLLAVY TIANWSGTVL EQAVSLVGRS APPEMLQMLT YLAMKHDARV QRVDTVRAYS FGALYFVEFM EYILLLRVWH QVDIVLSEDM
401: RLREAHAIGE SLQERIEKLP EVERAFVHAD FETTHKPEHT VRSRLPATEP
001: MAATEHRGLS GGDYNVDLLP IDQDDSPPSS WRLSLDTFRL PSSSPLSSGR HNGRTRLSRY LRTPKKERKV SEYYKQQEKL LEGFNEMETI NETGFVSGAP
101: TEEELKKLAK SERLAVHISN AANLVLFVAK VYASVESRSM AVIASTLDSL LDLLSGFILW FTANAMRTPN NFRYPIGKRR MQPVGIIVFA SVMATLGLQV
201: ILESTRLLVS KNGSHMSSTE EKWMIGIMAS ATVVKFLLML YCRSFQNEIV RAYAQDHLFD VITNSVGLAT AVLAVKFYWW IDPSGAILIA LYTISTWART
301: VLENVHSLIG RSAPPDFLAK LTFLIWNHHE KIKHIDTVRA YTFGSHYFVE VDIVLPEDMR LHEAHNIGET LQEKLEQLSE VERAFVHIDF EFTHRPEHKC
401: KV
101: TEEELKKLAK SERLAVHISN AANLVLFVAK VYASVESRSM AVIASTLDSL LDLLSGFILW FTANAMRTPN NFRYPIGKRR MQPVGIIVFA SVMATLGLQV
201: ILESTRLLVS KNGSHMSSTE EKWMIGIMAS ATVVKFLLML YCRSFQNEIV RAYAQDHLFD VITNSVGLAT AVLAVKFYWW IDPSGAILIA LYTISTWART
301: VLENVHSLIG RSAPPDFLAK LTFLIWNHHE KIKHIDTVRA YTFGSHYFVE VDIVLPEDMR LHEAHNIGET LQEKLEQLSE VERAFVHIDF EFTHRPEHKC
401: KV
Arabidopsis Description
Cation efflux family protein [Source:UniProtKB/TrEMBL;Acc:F4IF62]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.