Factsheet for PGSC0003DMT400010945

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g100300.1.1	Tomato	cytosol	91.79	96.45
KRG98100	Soybean	plasma membrane	59.18	83.33
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion	19.32	82.47
PGSC0003DMT400081988	Potato	cytosol	76.81	78.52
Os02t0775100-01	Rice	plasma membrane	37.44	75.98
GSMUA_Achr11P...	Banana	golgi, plasma membrane	42.03	74.04
VIT_06s0004g01110.t01	Wine grape	plastid	74.15	73.8
PGSC0003DMT400002845	Potato	cytosol	70.29	73.67
TraesCS4D01G234400.1	Wheat	cytosol, peroxisome, plasma membrane	70.53	73.0
TraesCS4B01G233300.1	Wheat	cytosol, peroxisome, plasma membrane	70.53	73.0
TraesCS4A01G077100.1	Wheat	cytosol, peroxisome, plasma membrane	70.53	72.82
GSMUA_Achr6P11470_001	Banana	cytosol	71.5	72.73
EER92593	Sorghum	cytosol, peroxisome, plasma membrane	69.81	72.43
Os03t0226400-01	Rice	vacuole	69.08	72.04
Zm00001d028344_P002	Maize	cytosol, peroxisome, plasma membrane	69.81	71.89
KRH17220	Soybean	cytosol, peroxisome, plasma membrane	65.94	69.64
CDX71976	Canola	cytosol, peroxisome, plasma membrane	68.36	69.02
Bra007377.1-P	Field mustard	cytosol, peroxisome, plasma membrane	68.12	68.78
CDY06055	Canola	cytosol, peroxisome, plasma membrane	68.12	68.78
AT3G58060.1	Thale cress	cytosol, peroxisome, plasma membrane	66.91	67.4
Bra014588.1-P	Field mustard	cytosol, peroxisome, plasma membrane	65.7	67.16
CDX88969	Canola	cytosol, peroxisome, plasma membrane	65.7	67.16
CDY67929	Canola	cytosol	65.22	66.67
TraesCS6B01G353300.1	Wheat	cytosol	65.94	66.59
TraesCS6A01G322500.1	Wheat	cytosol	65.46	66.1
CDY56242	Canola	cytosol, peroxisome, plasma membrane	65.22	65.85
Bra003316.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.98	65.61
CDY57242	Canola	cytosol	64.73	65.37
HORVU4Hr1G065110.3	Barley	cytosol, peroxisome	71.01	62.69
KXG31199	Sorghum	peroxisome	65.46	62.44
KRH72855	Soybean	cytosol, endoplasmic reticulum, peroxisome	63.04	61.27
TraesCS6D01G302400.1	Wheat	cytosol	65.46	60.22
Zm00001d018242_P001	Maize	cytosol	64.49	58.94
GSMUA_Achr10P...	Banana	cytosol	23.91	57.56
HORVU6Hr1G078910.2	Barley	cytosol	56.52	54.8
PGSC0003DMT400060460	Potato	cytosol, peroxisome, plasma membrane	46.86	48.38
GSMUA_Achr11P...	Banana	cytosol	30.68	46.69
PGSC0003DMT400029243	Potato	cytosol, peroxisome, plasma membrane	48.07	44.32
PGSC0003DMT400024996	Potato	cytosol, peroxisome, plasma membrane, plastid	33.82	39.77

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.2	Gene3D:3.30.70.1350	InterPro:Cation_efflux	InterPro:Cation_efflux_CTD	InterPro:Cation_efflux_CTD_sf
InterPro:Cation_efflux_TMD_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0008324	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0098655
InterPro:IPR027469	InterPro:IPR036837	UniProt:M0ZYU1	PFAM:PF01545	PFAM:PF16916	EnsemblPlantsGene:PGSC0003DMG400004287
PGSC:PGSC0003DMG400004287	EnsemblPlants:PGSC0003DMT400010945	PANTHER:PTHR43840	PANTHER:PTHR43840:SF3	SUPFAM:SSF160240	SUPFAM:SSF161111
TIGRFAMs:TIGR01297	TMHMM:TMhelix	UniParc:UPI000294A2F4	SEG:seg	:	:

Description

Metal tolerance protein [Source:PGSC_GENE;Acc:PGSC0003DMG400004287]

Coordinates

chr12:+:61014021..61016683

Molecular Weight (calculated)

46382.1 Da

IEP (calculated)

5.206

GRAVY (calculated)

0.028

Length

414 amino acids

Sequence
(BLAST)

001: MDGELESNGT NKMPLLEGWK LTGSGRESSR RFSRRNSFKS LRHDFLLRLP DKVIKSCVFD SEASSIINNI SKSSDLTKGE KEYYERQFET LKSFEEVDIA
101: VASDGIDEED LEEQAQHERA MTVSNCANIV LLALKIYATV KSGSLAIAAS TLDSLLDLMA GGILWFTHLS MKNINVYKYP IGKLRVQPVG IIVFAAIMAT
201: LGFQVLIEAV EQLVENKPPE KMALNQLAWL YSVMLTATVV KLALWLYCRS SGNDIVRAYA KDHYFDVVTN VVGLIAAVLG DKFYWWIDPV GALILAIYTI
301: TNWSGAVIEN AVSLVGQSAP PEVLQKLTYL VMRHPQVKRV DTVRAYTFGV LYFVEVDIEL PEDLPLKEAH VIGEGLQIKL EKLPEVERAF VHIDFECEHK
401: PEHSVPSRIP NSEP

Best Arabidopsis Sequence Match ( AT3G58060.1 )
(BLAST)

001: MEVNYCPETP LLSSNDHEAI DHKPKLTGMV SSMKSNFFAD LPQKLRSKID PENPLHLDVS KAAGLKEDEK EYYERQLATL KSFEEVESFL ARSDEYTIDE
101: KEEEEDRAER AAQELAMQIS NWANIFLLAL KIYATVKSGS IAIAASTLDS LLDLMAGGIL WFTHLSMKNV NIYKYPIGKL RVQPVGIIIF AAVMATLGFQ
201: VLLVAAEQLI SNEPSEKMNH VQLIWLYSIM LSATAIKLVL WIYCKSSRNH IVRAYAKDHH FDVVTNVLGL VAAVLANAFY WWLDPTGAIL LAIYTIVNWS
301: GTVMENAVSL IGQSAPPEVL QKLTYLVMRQ GGDNIKHVDT VRAYTFGVLY FVEVDIELPE DLPLKEAHAI GESLQIKLEE LPEVERAFVH LDFECHHKPE
401: HSVLSTIPND L

Arabidopsis Description

MTPC3Cation efflux family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VEZ3]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.