Factsheet for PGSC0003DMT400024996

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1
plasma membrane 2
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g017350.1.1	Tomato	cytosol, peroxisome, plasma membrane	68.47	76.27
VIT_19s0085g00650.t01	Wine grape	cytosol, peroxisome, plasma membrane	66.19	58.25
PGSC0003DMT400029243	Potato	cytosol, peroxisome, plasma membrane	71.59	56.12
KRH38261	Soybean	cytosol, peroxisome, plasma membrane	62.78	55.25
CDX81760	Canola	plasma membrane	58.24	53.95
Bra026067.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	61.08	53.75
CDY33342	Canola	cytosol, peroxisome, plasma membrane, plastid	61.08	53.75
CDY35081	Canola	cytosol, peroxisome, plasma membrane, plastid	61.08	53.75
Bra026723.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	60.8	53.37
CDX88546	Canola	cytosol	60.51	52.99
CDX87376	Canola	cytosol	60.23	52.74
CDY51006	Canola	golgi, plasma membrane	32.39	52.29
GSMUA_Achr8P18410_001	Banana	cytosol	59.66	52.11
GSMUA_Achr6P09720_001	Banana	peroxisome	57.95	52.04
AT1G79520.2	Thale cress	peroxisome	61.08	51.93
GSMUA_Achr10P...	Banana	peroxisome	55.4	51.45
AT1G16310.1	Thale cress	plasma membrane	61.93	50.93
Os01t0130000-01	Rice	cytosol	55.68	50.13
TraesCS3D01G038000.3	Wheat	cytosol	54.55	48.98
TraesCS3B01G040900.3	Wheat	cytosol, peroxisome, plasma membrane	53.98	48.35
TraesCS3A01G042600.1	Wheat	cytosol, peroxisome, plasma membrane	53.69	48.34
Zm00001d040002_P001	Maize	cytosol, peroxisome, plasma membrane	53.69	47.97
KXG31976	Sorghum	cytosol	52.56	46.84
CDX88395	Canola	endoplasmic reticulum, extracellular	17.05	43.8
PGSC0003DMT400060460	Potato	cytosol, peroxisome, plasma membrane	49.72	43.64
CDY61375	Canola	golgi	25.57	42.06
PGSC0003DMT400002845	Potato	cytosol	41.19	36.71
Bra035123.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.66	34.83
PGSC0003DMT400081988	Potato	cytosol	39.49	34.32
PGSC0003DMT400010945	Potato	cytosol	39.77	33.82

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.2	InterPro:Cation_efflux	InterPro:Cation_efflux_TMD_sf	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008324	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	GO:GO:0098655	InterPro:IPR027469	UniProt:M1AKV8	PFAM:PF01545
EnsemblPlantsGene:PGSC0003DMG400009656	PGSC:PGSC0003DMG400009656	EnsemblPlants:PGSC0003DMT400024996	PANTHER:PTHR43840	PANTHER:PTHR43840:SF16	SUPFAM:SSF161111
TIGRFAMs:TIGR01297	TMHMM:TMhelix	UniParc:UPI00029672A1	SEG:seg	:	:

Description

Metal tolerance protein [Source:PGSC_GENE;Acc:PGSC0003DMG400009656]

Coordinates

chr12:+:10921218..10925349

Molecular Weight (calculated)

40000.6 Da

IEP (calculated)

9.180

GRAVY (calculated)

-0.019

Length

352 amino acids

Sequence
(BLAST)

001: MSIISRSNGG SGGGDSFRTE LLSPAAQSVV DHSMSLGSTW KLNTSDFHLP QHRSYDHQSF SFLRLLRAFR NQRKVVEYYK KQERLLEGFN EMDTINECGY
101: LPGNLTEDEL KQLAKGEKIA IHASNIANMV LFIAKVYASI DSRSLAVISS TLDSLLDLLS GFILWFTSNA MKSPNQYRYP IGKKRMQPVG LVVFASIMAT
201: LGLQILFESG RQLITKSHPD RDPEKEKWMI GIMVSVTVIK FLLMIYCRRF KNEIVRAYAQ DHFFDVITNS IGLATAVLAI HFYWWIDPTG AIIIALYTMS
301: TWARTVLENV WALIGRTAPP DFLAKLTYLT IQSELNLLLM NNCDETRFKK QD

Best Arabidopsis Sequence Match ( AT1G16310.1 )
(BLAST)

001: MPLNSYIFFL FLTTSPRNTF FGIRTHSDRI MATEHITRTG DEYNVELLPS DDDAPPLESS WRLNLDAFQL PSSTGGRHDG RTRFSRYFRT PRKERRVSEY
101: YKKQERLLEG FNEMETIHEN GFASGVPTEE EMKKLAKSER LAVHISNATN LVLFVAKVYA SMESRSMAVI ASTLDSLLDL LSGFILWFTA NAMRKPNQFH
201: YPIGKRRMQP VGIIVFASVM ATLGLQVLLE SGRQLVAKSG IHMNSTEEKW MIGIMVSVTI VKFLLMLYCR GFQNEIVRAY AQDHLFDVVT NSIGLATAVL
301: AVKFYWWIDP TGAILIALYT IATWARTVLE NVHSLIGRSA PPDFLAKLTF LIWNHHEQIK HIDTVRAYTF GSHYFVEVDI VLPEDMRLQE AHNIGETLQE
401: KLEQLAEVER AFVHIDFEFT HRPEHKCN

Arabidopsis Description

MTP10Metal tolerance protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q0WU02]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.