Factsheet for VIT_19s0085g00650.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
vacuole 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g017350.1.1	Tomato	cytosol, peroxisome, plasma membrane	64.25	81.33
CDY51006	Canola	golgi, plasma membrane	41.5	76.15
KRH38261	Soybean	cytosol, peroxisome, plasma membrane	73.75	73.75
VIT_18s0041g00090.t01	Wine grape	peroxisome	70.5	71.94
GSMUA_Achr8P18410_001	Banana	cytosol	67.75	67.25
CDX81760	Canola	plasma membrane	63.0	66.32
GSMUA_Achr10P...	Banana	peroxisome	62.75	66.23
PGSC0003DMT400024996	Potato	cytosol, peroxisome, plasma membrane, plastid	58.25	66.19
GSMUA_Achr6P09720_001	Banana	peroxisome	64.75	66.07
CDY33342	Canola	cytosol, peroxisome, plasma membrane, plastid	65.0	65.0
CDY35081	Canola	cytosol, peroxisome, plasma membrane, plastid	65.0	65.0
Bra026067.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	65.0	65.0
Bra026723.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	65.0	64.84
CDX88546	Canola	cytosol	64.5	64.18
CDX87376	Canola	cytosol	64.0	63.68
CDY61375	Canola	golgi	34.0	63.55
TraesCS3D01G038000.3	Wheat	cytosol	61.25	62.5
TraesCS3A01G042600.1	Wheat	cytosol, peroxisome, plasma membrane	61.0	62.4
TraesCS3B01G040900.3	Wheat	cytosol, peroxisome, plasma membrane	60.75	61.83
Os01t0130000-01	Rice	cytosol	60.25	61.64
AT1G79520.2	Thale cress	peroxisome	63.75	61.59
AT1G16310.1	Thale cress	plasma membrane	65.5	61.22
Zm00001d040002_P001	Maize	cytosol, peroxisome, plasma membrane	59.75	60.66
KXG31976	Sorghum	cytosol	59.0	59.75
VIT_13s0019g00020.t01	Wine grape	cytosol, peroxisome, plasma membrane	58.25	58.4
VIT_08s0007g06760.t01	Wine grape	cytosol, peroxisome, plasma membrane	46.25	45.91
VIT_06s0004g01110.t01	Wine grape	plastid	47.5	45.67
Bra035123.1-P	Field mustard	cytosol, peroxisome, plasma membrane	63.75	42.29
CDX88395	Canola	endoplasmic reticulum, extracellular	13.75	40.15

Protein Annotations

Gene3D:1.20.1510.10	EntrezGene:100257125	wikigene:100257125	MapMan:24.2.9.2.2	Gene3D:3.30.70.1350	UniProt:A5BI82
EMBL:AM460349	ProteinID:CAN78996	ProteinID:CAN78996.1	ProteinID:CBI24164	ProteinID:CBI24164.3	InterPro:Cation_efflux
InterPro:Cation_efflux_CTD	InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf	EMBL:FN595503	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008324	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	GO:GO:0098655	InterPro:IPR027469	InterPro:IPR036837	EntrezGene:LOC100257125
wikigene:LOC100257125	PFAM:PF01545	PFAM:PF16916	PANTHER:PTHR43840	PANTHER:PTHR43840:SF16	SUPFAM:SSF160240
SUPFAM:SSF161111	TIGRFAMs:TIGR01297	TMHMM:TMhelix	UniParc:UPI0001524574	ArrayExpress:VIT_19s0085g00650	EnsemblPlantsGene:VIT_19s0085g00650
EnsemblPlants:VIT_19s0085g00650.t01	RefSeq:XP_002263815	RefSeq:XP_002263815.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr19:+:23086959..23089970

Molecular Weight (calculated)

45739.6 Da

IEP (calculated)

6.526

GRAVY (calculated)

-0.024

Length

400 amino acids

Sequence
(BLAST)

001: MQTELQSESF DYRTELLSPA LPGENGSAMR VPSWRINFEE FQVAEKQKDS NFGVAKLVKT IRKQKKLADY YKKQGKLLEG FNEVDAFTEL GVLPGSLTED
101: EMKQLANNER LAIQASNIAN MVLFIAKVYA SVESRSLAVI ASTLDSLLDL LSGFILWFTA SAMRKPNQYQ YPIGKKRMQP VGIVVFASVM ATLGLQILFE
201: SGRELIIKAQ PDRDPVKERW MIGIMVSVTV IKFALMTYCR RFKNEIIRAY AQDHFFDVIT NSIGLVTAVL AIHFFWWIDP LGAILIALYT MATWAKTVME
301: NVWSLIGRTA PPEFLAKLTY LIWNYHEEIK HIDTVRAYNF GSQYFVEVDI VVPEDMSLTQ AHNIGEALQE KLEQLPEVER AFVHIDFEYT HKPEHMPKKC

Best Arabidopsis Sequence Match ( AT1G16310.1 )
(BLAST)

001: MPLNSYIFFL FLTTSPRNTF FGIRTHSDRI MATEHITRTG DEYNVELLPS DDDAPPLESS WRLNLDAFQL PSSTGGRHDG RTRFSRYFRT PRKERRVSEY
101: YKKQERLLEG FNEMETIHEN GFASGVPTEE EMKKLAKSER LAVHISNATN LVLFVAKVYA SMESRSMAVI ASTLDSLLDL LSGFILWFTA NAMRKPNQFH
201: YPIGKRRMQP VGIIVFASVM ATLGLQVLLE SGRQLVAKSG IHMNSTEEKW MIGIMVSVTI VKFLLMLYCR GFQNEIVRAY AQDHLFDVVT NSIGLATAVL
301: AVKFYWWIDP TGAILIALYT IATWARTVLE NVHSLIGRSA PPDFLAKLTF LIWNHHEQIK HIDTVRAYTF GSHYFVEVDI VLPEDMRLQE AHNIGETLQE
401: KLEQLAEVER AFVHIDFEFT HRPEHKCN

Arabidopsis Description

MTP10Metal tolerance protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q0WU02]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.