CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
vacuole 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026067.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	100.0	100.0
CDY33342	Canola	cytosol, peroxisome, plasma membrane, plastid	99.0	99.0
CDY51006	Canola	golgi, plasma membrane	51.25	94.04
AT1G16310.1	Thale cress	plasma membrane	94.0	87.85
CDX81760	Canola	plasma membrane	82.25	86.58
CDX87376	Canola	cytosol	86.75	86.32
CDX88546	Canola	cytosol	86.5	86.07
CDY61375	Canola	golgi	44.5	83.18
Solyc12g017350.1.1	Tomato	cytosol, peroxisome, plasma membrane	58.5	74.05
VIT_18s0041g00090.t01	Wine grape	peroxisome	70.5	71.94
GSMUA_Achr10P...	Banana	peroxisome	66.5	70.18
CDY20436	Canola	endoplasmic reticulum, extracellular	21.25	69.11
CDY20439	Canola	endoplasmic reticulum, extracellular	21.25	69.11
Solyc10g005500.2.1	Tomato	cytosol	69.0	66.99
TraesCS3B01G040900.3	Wheat	cytosol, peroxisome, plasma membrane	64.75	65.9
TraesCS3D01G038000.3	Wheat	cytosol	64.25	65.56
TraesCS3A01G042600.1	Wheat	cytosol, peroxisome, plasma membrane	64.0	65.47
GSMUA_Achr6P09720_001	Banana	peroxisome	64.0	65.31
GSMUA_Achr8P18410_001	Banana	cytosol	65.75	65.26
VIT_19s0085g00650.t01	Wine grape	cytosol, peroxisome, plasma membrane	65.0	65.0
Zm00001d040002_P001	Maize	cytosol, peroxisome, plasma membrane	64.0	64.97
Os01t0130000-01	Rice	cytosol	63.25	64.71
KXG31976	Sorghum	cytosol	62.75	63.54
PGSC0003DMT400024996	Potato	cytosol, peroxisome, plasma membrane, plastid	53.75	61.08
PGSC0003DMT400029243	Potato	cytosol, peroxisome, plasma membrane	68.5	61.02
CDY07013	Canola	cytosol	56.5	57.07
CDY53587	Canola	cytosol, nucleus, peroxisome	55.75	57.03
CDX93260	Canola	cytosol	56.25	56.82
CDX88395	Canola	endoplasmic reticulum, extracellular	18.75	54.74
KRG98101	Soybean	cytosol	7.5	51.72
CDY06055	Canola	cytosol, peroxisome, plasma membrane	48.0	46.83
CDX71976	Canola	cytosol, peroxisome, plasma membrane	47.75	46.59
CDY56242	Canola	cytosol, peroxisome, plasma membrane	47.0	45.85
CDY57242	Canola	cytosol	47.0	45.85
CDX88969	Canola	cytosol, peroxisome, plasma membrane	46.0	45.43
CDY67929	Canola	cytosol	45.75	45.19
CDY20438	Canola	cytosol	26.0	45.02
CDY20435	Canola	cytosol, mitochondrion, nucleus, peroxisome	26.75	39.63

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.2	Gene3D:3.30.70.1350	GO:A0A078HBH8	UniProt:A0A078HBH8	EnsemblPlants:CDY35081
ProteinID:CDY35081	ProteinID:CDY35081.1	InterPro:Cation_efflux	InterPro:Cation_efflux_CTD	InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf
ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0008324	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0098655
EnsemblPlantsGene:GSBRNA2T00057952001	InterPro:IPR027469	InterPro:IPR036837	PFAM:PF01545	PFAM:PF16916	PANTHER:PTHR43840
PANTHER:PTHR43840:SF2	SUPFAM:SSF160240	SUPFAM:SSF161111	TIGRFAMs:TIGR01297	TMHMM:TMhelix	UniParc:UPI000253F18D
SEG:seg	:	:	:	:	:

Description

BnaA06g10910DBnaA06g10910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HBH8]

Coordinates

chrLK032346:+:121028..123609

Molecular Weight (calculated)

45753.1 Da

IEP (calculated)

7.040

GRAVY (calculated)

-0.120

Length

400 amino acids

Sequence
(BLAST)

001: MATEHITRTS DQYNVELLPS DEDAPPLSSS WRLSLDTFRL PSSPSSTGHH DVRTRFSRYF RTPRKERKVS EYYKKQERLL EGFNEMESIH ETGFASGAPT
101: EEEMKKLAKS ERLAVHISNA TNLVLFVAKV YASMESRSMA VIASTLDSLL DLLSGFILWF TANAMRKPNH FHYPIGKRRM QPVGIIVFAS VMATLGLQVL
201: LESGRQLVSK SGIHMNSTEE KWMIGIMVSV TIVKFLLMLY CRGFQNEIVR AYAQDHLFDV VTNSIGLATA VLAVKFYWWI DPSGAILIAL YTIGTWARTV
301: LENVHSLIGR SAPPDFLAKL TFLIWNHHEQ IKHIDTVRAY TFGSHYFVEV DIVLPEDMRL QEAHNIGETL QEKLEQLAEV ERAFVHIDFE FTHRPEHKYS

Best Arabidopsis Sequence Match ( AT1G16310.1 )
(BLAST)

001: MPLNSYIFFL FLTTSPRNTF FGIRTHSDRI MATEHITRTG DEYNVELLPS DDDAPPLESS WRLNLDAFQL PSSTGGRHDG RTRFSRYFRT PRKERRVSEY
101: YKKQERLLEG FNEMETIHEN GFASGVPTEE EMKKLAKSER LAVHISNATN LVLFVAKVYA SMESRSMAVI ASTLDSLLDL LSGFILWFTA NAMRKPNQFH
201: YPIGKRRMQP VGIIVFASVM ATLGLQVLLE SGRQLVAKSG IHMNSTEEKW MIGIMVSVTI VKFLLMLYCR GFQNEIVRAY AQDHLFDVVT NSIGLATAVL
301: AVKFYWWIDP TGAILIALYT IATWARTVLE NVHSLIGRSA PPDFLAKLTF LIWNHHEQIK HIDTVRAYTF GSHYFVEVDI VLPEDMRLQE AHNIGETLQE
401: KLEQLAEVER AFVHIDFEFT HRPEHKCN

Arabidopsis Description

MTP10Metal tolerance protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q0WU02]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.