Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51006 | Canola | golgi, plasma membrane | 55.26 | 96.33 |
| Bra026723.1-P | Field mustard | cytosol, peroxisome, plasma membrane, plastid | 89.21 | 84.54 |
| CDY35081 | Canola | cytosol, peroxisome, plasma membrane, plastid | 86.58 | 82.25 |
| CDY33342 | Canola | cytosol, peroxisome, plasma membrane, plastid | 86.58 | 82.25 |
| CDY61375 | Canola | golgi | 45.0 | 79.91 |
| CDX88546 | Canola | cytosol | 82.11 | 77.61 |
| CDX87376 | Canola | cytosol | 81.84 | 77.36 |
| AT1G16310.1 | Thale cress | plasma membrane | 85.79 | 76.17 |
| Solyc12g017350.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 61.58 | 74.05 |
| CDY20436 | Canola | endoplasmic reticulum, extracellular | 22.37 | 69.11 |
| CDY20439 | Canola | endoplasmic reticulum, extracellular | 22.37 | 69.11 |
| VIT_18s0041g00090.t01 | Wine grape | peroxisome | 70.0 | 67.86 |
| GSMUA_Achr10P... | Banana | peroxisome | 67.63 | 67.81 |
| Zm00001d040002_P001 | Maize | cytosol, peroxisome, plasma membrane | 66.05 | 63.71 |
| Os01t0130000-01 | Rice | cytosol | 65.0 | 63.17 |
| VIT_19s0085g00650.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 66.32 | 63.0 |
| Solyc10g005500.2.1 | Tomato | cytosol | 68.16 | 62.86 |
| TraesCS3B01G040900.3 | Wheat | cytosol, peroxisome, plasma membrane | 65.0 | 62.85 |
| TraesCS3D01G038000.3 | Wheat | cytosol | 64.74 | 62.76 |
| TraesCS3A01G042600.1 | Wheat | cytosol, peroxisome, plasma membrane | 64.47 | 62.66 |
| GSMUA_Achr8P18410_001 | Banana | cytosol | 66.05 | 62.28 |
| KXG31976 | Sorghum | cytosol | 64.74 | 62.28 |
| GSMUA_Achr6P09720_001 | Banana | peroxisome | 63.95 | 61.99 |
| PGSC0003DMT400024996 | Potato | cytosol, peroxisome, plasma membrane, plastid | 53.95 | 58.24 |
| PGSC0003DMT400029243 | Potato | cytosol, peroxisome, plasma membrane | 67.89 | 57.46 |
| CDY53587 | Canola | cytosol, nucleus, peroxisome | 57.63 | 56.01 |
| CDY07013 | Canola | cytosol | 57.89 | 55.56 |
| CDX93260 | Canola | cytosol | 57.63 | 55.3 |
| CDX88395 | Canola | endoplasmic reticulum, extracellular | 18.68 | 51.82 |
| KRG98101 | Soybean | cytosol | 7.89 | 51.72 |
| CDY06055 | Canola | cytosol, peroxisome, plasma membrane | 48.95 | 45.37 |
| CDX71976 | Canola | cytosol, peroxisome, plasma membrane | 48.68 | 45.12 |
| CDY57242 | Canola | cytosol | 47.63 | 44.15 |
| CDX88969 | Canola | cytosol, peroxisome, plasma membrane | 46.84 | 43.95 |
| CDY67929 | Canola | cytosol | 46.84 | 43.95 |
| CDY56242 | Canola | cytosol, peroxisome, plasma membrane | 47.37 | 43.9 |
| CDY20438 | Canola | cytosol | 26.05 | 42.86 |
| CDY20435 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 26.58 | 37.41 |
Protein Annotations
| Gene3D:1.20.1510.10 | MapMan:24.2.9.2.2 | Gene3D:3.30.70.1350 | GO:A0A078CY40 | EnsemblPlants:CDX81760 | ProteinID:CDX81760 |
| ProteinID:CDX81760.1 | InterPro:Cation_efflux | InterPro:Cation_efflux_CTD | InterPro:Cation_efflux_CTD_sf | InterPro:Cation_efflux_TMD_sf | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 |
| GO:GO:0008324 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00136693001 | InterPro:IPR027469 |
| InterPro:IPR036837 | PFAM:PF01545 | PFAM:PF16916 | PANTHER:PTHR43840 | PANTHER:PTHR43840:SF2 | SUPFAM:SSF160240 |
| SUPFAM:SSF161111 | TIGRFAMs:TIGR01297 | TMHMM:TMhelix | UniParc:UPI0004EE14C3 | SEG:seg | : |
Description
BnaC08g38410D
Coordinates
chrLK031826:+:645286..647287
Molecular Weight (calculated)
43197.7 Da
IEP (calculated)
6.508
GRAVY (calculated)
0.146
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLGDLRYTK YILSSVLEMC TISCCIYILE KCLSLSILSC VNAGKERKVY EYYKKQERLL EGFNEMETIH EPGFASGAST EEEMKKLAKS ERLAVHISNA
101: TNLVLFVAKV YASMESRSMA VIASTLDSLL DLLSGFILWF TANAMSKPNH FHYPIGKRRM QPVGIIVFAS VMATLGLQVL LESGRQLASK NGIDMNSTEE
201: KWMIGIMVSV TIIKFLLMLY CRGFQNEIVR AYAQDHFFDV VTNSIGLATA VLAVKFYWWI DPSGAILIAL YTIGTWARTV LENVHSLIGR SAPPEFLTKL
301: TFLIWNHHEQ IKHIDTVSAY TFGSHYFVEV DIVLPEDMRL QEAHNIGETL QEKLEQLAEV ERAFVHIDFE FTHRPEHKCN
101: TNLVLFVAKV YASMESRSMA VIASTLDSLL DLLSGFILWF TANAMSKPNH FHYPIGKRRM QPVGIIVFAS VMATLGLQVL LESGRQLASK NGIDMNSTEE
201: KWMIGIMVSV TIIKFLLMLY CRGFQNEIVR AYAQDHFFDV VTNSIGLATA VLAVKFYWWI DPSGAILIAL YTIGTWARTV LENVHSLIGR SAPPEFLTKL
301: TFLIWNHHEQ IKHIDTVSAY TFGSHYFVEV DIVLPEDMRL QEAHNIGETL QEKLEQLAEV ERAFVHIDFE FTHRPEHKCN
001: MPLNSYIFFL FLTTSPRNTF FGIRTHSDRI MATEHITRTG DEYNVELLPS DDDAPPLESS WRLNLDAFQL PSSTGGRHDG RTRFSRYFRT PRKERRVSEY
101: YKKQERLLEG FNEMETIHEN GFASGVPTEE EMKKLAKSER LAVHISNATN LVLFVAKVYA SMESRSMAVI ASTLDSLLDL LSGFILWFTA NAMRKPNQFH
201: YPIGKRRMQP VGIIVFASVM ATLGLQVLLE SGRQLVAKSG IHMNSTEEKW MIGIMVSVTI VKFLLMLYCR GFQNEIVRAY AQDHLFDVVT NSIGLATAVL
301: AVKFYWWIDP TGAILIALYT IATWARTVLE NVHSLIGRSA PPDFLAKLTF LIWNHHEQIK HIDTVRAYTF GSHYFVEVDI VLPEDMRLQE AHNIGETLQE
401: KLEQLAEVER AFVHIDFEFT HRPEHKCN
101: YKKQERLLEG FNEMETIHEN GFASGVPTEE EMKKLAKSER LAVHISNATN LVLFVAKVYA SMESRSMAVI ASTLDSLLDL LSGFILWFTA NAMRKPNQFH
201: YPIGKRRMQP VGIIVFASVM ATLGLQVLLE SGRQLVAKSG IHMNSTEEKW MIGIMVSVTI VKFLLMLYCR GFQNEIVRAY AQDHLFDVVT NSIGLATAVL
301: AVKFYWWIDP TGAILIALYT IATWARTVLE NVHSLIGRSA PPDFLAKLTF LIWNHHEQIK HIDTVRAYTF GSHYFVEVDI VLPEDMRLQE AHNIGETLQE
401: KLEQLAEVER AFVHIDFEFT HRPEHKCN
Arabidopsis Description
MTP10Metal tolerance protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q0WU02]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.