Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY61375 | Canola | golgi | 33.58 | 21.5 |
| CDY20438 | Canola | cytosol | 34.31 | 20.35 |
| CDX87376 | Canola | cytosol | 56.2 | 19.15 |
| CDX88546 | Canola | cytosol | 56.2 | 19.15 |
| CDY35081 | Canola | cytosol, peroxisome, plasma membrane, plastid | 54.74 | 18.75 |
| CDY33342 | Canola | cytosol, peroxisome, plasma membrane, plastid | 54.74 | 18.75 |
| CDX81760 | Canola | plasma membrane | 51.82 | 18.68 |
| CDY20435 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 35.77 | 18.15 |
| PGSC0003DMT400024996 | Potato | cytosol, peroxisome, plasma membrane, plastid | 43.8 | 17.05 |
| GSMUA_Achr10P... | Banana | peroxisome | 40.88 | 14.78 |
| VIT_18s0041g00090.t01 | Wine grape | peroxisome | 40.88 | 14.29 |
| Zm00001d040002_P001 | Maize | cytosol, peroxisome, plasma membrane | 40.88 | 14.21 |
| VIT_19s0085g00650.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 40.15 | 13.75 |
| GSMUA_Achr8P18410_001 | Banana | cytosol | 39.42 | 13.4 |
| Solyc10g005500.2.1 | Tomato | cytosol | 40.15 | 13.35 |
| Os01t0130000-01 | Rice | cytosol | 37.96 | 13.3 |
| TraesCS3D01G038000.3 | Wheat | cytosol | 37.96 | 13.27 |
| TraesCS3B01G040900.3 | Wheat | cytosol, peroxisome, plasma membrane | 37.23 | 12.98 |
| KXG31976 | Sorghum | cytosol | 37.23 | 12.91 |
| TraesCS3A01G042600.1 | Wheat | cytosol, peroxisome, plasma membrane | 36.5 | 12.79 |
| GSMUA_Achr6P09720_001 | Banana | peroxisome | 35.77 | 12.5 |
| PGSC0003DMT400029243 | Potato | cytosol, peroxisome, plasma membrane | 40.88 | 12.47 |
| CDY07013 | Canola | cytosol | 35.77 | 12.37 |
| CDY53587 | Canola | cytosol, nucleus, peroxisome | 35.04 | 12.28 |
| CDX93260 | Canola | cytosol | 35.04 | 12.12 |
| Solyc12g017350.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 27.01 | 11.71 |
| CDY06055 | Canola | cytosol, peroxisome, plasma membrane | 23.36 | 7.8 |
| CDX71976 | Canola | cytosol, peroxisome, plasma membrane | 22.63 | 7.56 |
| CDY57242 | Canola | cytosol | 22.63 | 7.56 |
| CDY56242 | Canola | cytosol, peroxisome, plasma membrane | 22.63 | 7.56 |
| CDY67929 | Canola | cytosol | 21.17 | 7.16 |
| CDX88969 | Canola | cytosol, peroxisome, plasma membrane | 21.17 | 7.16 |
| KRG98101 | Soybean | cytosol | 0.0 | 0.0 |
| CDY20439 | Canola | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
| CDY51006 | Canola | golgi, plasma membrane | 0.0 | 0.0 |
| CDY20436 | Canola | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX88395 | EnsemblPlantsGene:GSBRNA2T00147922001 | GO:A0A078DGN8 | PANTHER:PTHR43840 | PANTHER:PTHR43840:SF2 | ProteinID:CDX88395 |
| ProteinID:CDX88395.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE9563 | MapMan:35.1 | : |
Description
BnaC06g38390D
Coordinates
chrLK031855:-:740519..743411
Molecular Weight (calculated)
15515.9 Da
IEP (calculated)
9.801
GRAVY (calculated)
0.186
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLFYGISIF SIISITFSDV SFISLSKLML LSLNTYNLRH GFYFFFSCRK SEKERKVSEY YKKQEKLLEG FNEMETINET GFVSGAPASN REMKKLAKSE
101: SLAVHISNAV NLVLFVAKVY ASVESRSLAV IASKILN
101: SLAVHISNAV NLVLFVAKVY ASVESRSLAV IASKILN
001: MGFTLFCCEK SEKERKVSEY YKQQEKLLEG FNEMETINET GFVSGAPTEE ELKKLAKSER LAVHISNAAN LVLFVAKVYA SVESRSMAVI ASTLDSLLDL
101: LSGFILWFTA NAMRTPNNFR YPIGKRRMQP VGIIVFASVM ATLGLQVILE STRLLVSKNG SHMSSTEEKW MIGIMASATV VKFLLMLYCR SFQNEIVRAY
201: AQDHLFDVIT NSVGLATAVL AVKFYWWIDP SGAILIALYT ISTWARTVLE NVHSLIGRSA PPDFLAKLTF LIWNHHEKIK HIDTVRAYTF GSHYFVEVDI
301: VLPEDMRLHE AHNIGETLQE KLEQLSEVER AFVHIDFEFT HRPEHKCKV
101: LSGFILWFTA NAMRTPNNFR YPIGKRRMQP VGIIVFASVM ATLGLQVILE STRLLVSKNG SHMSSTEEKW MIGIMASATV VKFLLMLYCR SFQNEIVRAY
201: AQDHLFDVIT NSVGLATAVL AVKFYWWIDP SGAILIALYT ISTWARTVLE NVHSLIGRSA PPDFLAKLTF LIWNHHEKIK HIDTVRAYTF GSHYFVEVDI
301: VLPEDMRLHE AHNIGETLQE KLEQLSEVER AFVHIDFEFT HRPEHKCKV
Arabidopsis Description
Cation efflux family protein [Source:UniProtKB/TrEMBL;Acc:F4IF62]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.