CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003316.1-P	Field mustard	cytosol, peroxisome, plasma membrane	98.05	98.05
CDY57242	Canola	cytosol	98.05	98.05
CDY06055	Canola	cytosol, peroxisome, plasma membrane	87.8	87.8
CDX88969	Canola	cytosol, peroxisome, plasma membrane	86.34	87.41
CDY67929	Canola	cytosol	85.85	86.91
CDX71976	Canola	cytosol, peroxisome, plasma membrane	86.59	86.59
AT3G58060.1	Thale cress	cytosol, peroxisome, plasma membrane	86.59	86.37
KRG98100	Soybean	plasma membrane	56.83	79.25
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion	18.05	76.29
GSMUA_Achr11P...	Banana	golgi, plasma membrane	39.51	68.94
Solyc12g100300.1.1	Tomato	cytosol	65.61	68.27
Os03t0226400-01	Rice	vacuole	65.61	67.76
TraesCS4D01G234400.1	Wheat	cytosol, peroxisome, plasma membrane	65.85	67.5
TraesCS4B01G233300.1	Wheat	cytosol, peroxisome, plasma membrane	65.85	67.5
TraesCS4A01G077100.1	Wheat	cytosol, peroxisome, plasma membrane	65.85	67.33
KRH17220	Soybean	cytosol, peroxisome, plasma membrane	63.9	66.84
GSMUA_Achr6P11470_001	Banana	cytosol	66.34	66.83
Os02t0775100-01	Rice	plasma membrane	33.17	66.67
EER92593	Sorghum	cytosol, peroxisome, plasma membrane	64.63	66.42
Zm00001d028344_P002	Maize	cytosol, peroxisome, plasma membrane	64.88	66.17
Solyc01g006150.2.1	Tomato	cytosol	64.88	65.68
VIT_06s0004g01110.t01	Wine grape	plastid	66.59	65.62
PGSC0003DMT400081988	Potato	cytosol	64.63	65.43
PGSC0003DMT400010945	Potato	cytosol	65.85	65.22
TraesCS6B01G353300.1	Wheat	cytosol	60.98	60.98
TraesCS6A01G322500.1	Wheat	cytosol	60.49	60.49
CDY20439	Canola	endoplasmic reticulum, extracellular	17.8	59.35
CDY20436	Canola	endoplasmic reticulum, extracellular	17.8	59.35
CDY51006	Canola	golgi, plasma membrane	30.98	58.26
KRH72855	Soybean	cytosol, endoplasmic reticulum, peroxisome	59.76	57.51
HORVU4Hr1G065110.3	Barley	cytosol, peroxisome	65.61	57.36
KXG31199	Sorghum	peroxisome	60.0	56.68
TraesCS6D01G302400.1	Wheat	cytosol	60.24	54.89
Zm00001d018242_P001	Maize	cytosol	60.0	54.3
GSMUA_Achr10P...	Banana	cytosol	21.71	51.74
HORVU6Hr1G078910.2	Barley	cytosol	52.2	50.12
CDX88546	Canola	cytosol	46.83	47.76
CDX87376	Canola	cytosol	46.59	47.51
CDX81760	Canola	plasma membrane	43.9	47.37
CDY61375	Canola	golgi	24.63	47.2
CDY33342	Canola	cytosol, peroxisome, plasma membrane, plastid	45.85	47.0
CDY35081	Canola	cytosol, peroxisome, plasma membrane, plastid	45.85	47.0
CDY53587	Canola	cytosol, nucleus, peroxisome	44.15	46.29
CDY07013	Canola	cytosol	43.41	44.95
CDX93260	Canola	cytosol	43.17	44.7
GSMUA_Achr11P...	Banana	cytosol	29.02	43.75
CDY20438	Canola	cytosol	21.22	37.66
CDY20435	Canola	cytosol, mitochondrion, nucleus, peroxisome	21.46	32.59
CDX88395	Canola	endoplasmic reticulum, extracellular	7.56	22.63

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.2	Gene3D:3.30.70.1350	GO:A0A078J004	UniProt:A0A078J004	EnsemblPlants:CDY56242
ProteinID:CDY56242	ProteinID:CDY56242.1	InterPro:Cation_efflux	InterPro:Cation_efflux_CTD	InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf
ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0008324	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0098655
EnsemblPlantsGene:GSBRNA2T00018006001	InterPro:IPR027469	InterPro:IPR036837	PFAM:PF01545	PFAM:PF16916	PANTHER:PTHR43840
PANTHER:PTHR43840:SF3	SUPFAM:SSF160240	SUPFAM:SSF161111	TIGRFAMs:TIGR01297	TMHMM:TMhelix	UniParc:UPI0004EF2D52
SEG:seg	:	:	:	:	:

Description

BnaA07g37950DBnaA07g37950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J004]

Coordinates

chrLK033471:+:20452..22305

Molecular Weight (calculated)

46301.0 Da

IEP (calculated)

5.307

GRAVY (calculated)

0.065

Length

410 amino acids

Sequence
(BLAST)

001: MEVNSTETPL LSSNDHEAEV YKPKLTCSVS TMKSNFFTGL PRKLRSKIDS EDPFHIDFSN VVGLTRDEKK YYKRQLATLK SFEEVESFIA RSEEHVIDEK
101: REEEDRAERA AQEMAMQISN WANIFLLSLK IYATIKSGSI AIAASTLDSL LDLMAGGILW FTHLSMKNIN IYKYPIGKLR VQPVGIIIFA AVMATLGFQV
201: LLVAAEQLIA NEPPEKMSDD QLVWLYSIML SATAIKLVLW IYCKSSRNHI VRAYAKDHHF DVVTNVLGLI SAVLGNAFYW WIDPAGAILL AIYTIINWSG
301: TVMENAVSLI GQAAPPEVLQ KLTYLVLRQG ADNIKCVDTI RVYTFGVLYF VEVDIELPEN LQLKEAHAIG ESLQIKLEEL PEVERAFVHL DFESRHKPEH
401: SVFSTIPNDL

Best Arabidopsis Sequence Match ( AT3G58060.1 )
(BLAST)

001: MEVNYCPETP LLSSNDHEAI DHKPKLTGMV SSMKSNFFAD LPQKLRSKID PENPLHLDVS KAAGLKEDEK EYYERQLATL KSFEEVESFL ARSDEYTIDE
101: KEEEEDRAER AAQELAMQIS NWANIFLLAL KIYATVKSGS IAIAASTLDS LLDLMAGGIL WFTHLSMKNV NIYKYPIGKL RVQPVGIIIF AAVMATLGFQ
201: VLLVAAEQLI SNEPSEKMNH VQLIWLYSIM LSATAIKLVL WIYCKSSRNH IVRAYAKDHH FDVVTNVLGL VAAVLANAFY WWLDPTGAIL LAIYTIVNWS
301: GTVMENAVSL IGQSAPPEVL QKLTYLVMRQ GGDNIKHVDT VRAYTFGVLY FVEVDIELPE DLPLKEAHAI GESLQIKLEE LPEVERAFVH LDFECHHKPE
401: HSVLSTIPND L

Arabidopsis Description

MTPC3Cation efflux family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VEZ3]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.