Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
EER92593 | Sorghum | cytosol, peroxisome, plasma membrane | 97.01 | 97.74 |
TraesCS4D01G234400.1 | Wheat | cytosol, peroxisome, plasma membrane | 91.54 | 92.0 |
TraesCS4B01G233300.1 | Wheat | cytosol, peroxisome, plasma membrane | 91.54 | 92.0 |
TraesCS4A01G077100.1 | Wheat | cytosol, peroxisome, plasma membrane | 91.54 | 91.77 |
Os03t0226400-01 | Rice | vacuole | 90.05 | 91.18 |
GSMUA_Achr10P... | Banana | extracellular, golgi, mitochondrion | 20.9 | 86.6 |
KRG98100 | Soybean | plasma membrane | 60.45 | 82.65 |
GSMUA_Achr11P... | Banana | golgi, plasma membrane | 47.01 | 80.43 |
GSMUA_Achr6P11470_001 | Banana | cytosol | 80.6 | 79.61 |
HORVU4Hr1G065110.3 | Barley | cytosol, peroxisome | 91.29 | 78.25 |
Solyc03g052990.2.1 | Tomato | cytosol, golgi, peroxisome | 71.89 | 78.11 |
PGSC0003DMT400002845 | Potato | cytosol | 74.13 | 75.44 |
VIT_06s0004g01110.t01 | Wine grape | plastid | 76.37 | 73.8 |
PGSC0003DMT400081988 | Potato | cytosol | 73.38 | 72.84 |
Solyc01g006150.2.1 | Tomato | cytosol | 72.89 | 72.35 |
KRH67095 | Soybean | cytosol | 70.9 | 71.61 |
VIT_08s0007g06760.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 70.9 | 70.72 |
KRG95425 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 62.69 | 70.59 |
Solyc12g100300.1.1 | Tomato | cytosol | 68.91 | 70.3 |
PGSC0003DMT400010945 | Potato | cytosol | 71.89 | 69.81 |
KRH17220 | Soybean | cytosol, peroxisome, plasma membrane | 66.17 | 67.86 |
CDY06055 | Canola | cytosol, peroxisome, plasma membrane | 68.91 | 67.56 |
CDX71976 | Canola | cytosol, peroxisome, plasma membrane | 68.91 | 67.56 |
Bra007377.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 68.91 | 67.56 |
CDX88969 | Canola | cytosol, peroxisome, plasma membrane | 67.66 | 67.16 |
Bra014588.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 67.66 | 67.16 |
AT3G58060.1 | Thale cress | cytosol, peroxisome, plasma membrane | 68.66 | 67.15 |
CDY67929 | Canola | cytosol | 67.16 | 66.67 |
CDY57242 | Canola | cytosol | 66.92 | 65.61 |
Bra003316.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 66.42 | 65.12 |
CDY56242 | Canola | cytosol, peroxisome, plasma membrane | 66.17 | 64.88 |
Zm00001d018242_P001 | Maize | cytosol | 68.16 | 60.49 |
KRH72855 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 62.19 | 58.69 |
Zm00001d042939_P002 | Maize | cytosol, peroxisome, plasma membrane | 49.5 | 47.27 |
Zm00001d040002_P001 | Maize | cytosol, peroxisome, plasma membrane | 45.77 | 46.7 |
Protein Annotations
Gene3D:1.20.1510.10 | EntrezGene:100381541 | MapMan:24.2.9.2.2 | Gene3D:3.30.70.1350 | EMBL:BT061564 | UniProt:C0HGV8 |
InterPro:Cation_efflux | InterPro:Cation_efflux_CTD | InterPro:Cation_efflux_CTD_sf | InterPro:Cation_efflux_TMD_sf | GO:GO:0003674 | GO:GO:0005215 |
GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0008324 | GO:GO:0016020 |
GO:GO:0016021 | GO:GO:0055085 | GO:GO:0098655 | InterPro:IPR027469 | InterPro:IPR036837 | ProteinID:ONL95745.1 |
PFAM:PF01545 | PFAM:PF16916 | PANTHER:PTHR43840 | PANTHER:PTHR43840:SF3 | SUPFAM:SSF160240 | SUPFAM:SSF161111 |
TIGRFAMs:TIGR01297 | TMHMM:TMhelix | UniParc:UPI0001948551 | EnsemblPlantsGene:Zm00001d028344 | EnsemblPlants:Zm00001d028344_P002 | EnsemblPlants:Zm00001d028344_T002 |
SEG:seg | : | : | : | : | : |
Description
Putative metal tolerance protein C3
Coordinates
chr1:-:31351458..31356305
Molecular Weight (calculated)
45091.4 Da
IEP (calculated)
4.993
GRAVY (calculated)
0.038
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MDANGCGEND DARAPLLAGP GRRRNSVASM RGEFVSRLPK KVLDAVDPER PSHVDFSRSK GLLEGEREYY EKQFATLRSF EEVDSLEESN EINEDEELAE
101: QIQSEFAMKI SNYANIVLLA LKVYATIKSG SIAIAASTLD SLLDLMAGGI LWFTHLSMKS INVYKYPIGK LRVQPVGIII FAAVMATLGF QVFIQAVEKL
201: VVNEAPDKLN QVQLLWLYSI MIFATIVKLG LWLYCRTSGN KIVRAYAKDH YFDVVTNVVG LAAAVLGDRF YWWIDPIGAI VLAVYTISNW SGTVWENAVS
301: LVGESAPPEM LQKLTYLAIR HHPQIKRVDT VRAYTFGVLY FVEVDIELPE DLPLKEAHAI GESLQIKIEE LPEVERAFVH LDFECDHKPE HSILNKLPSS
401: QP
101: QIQSEFAMKI SNYANIVLLA LKVYATIKSG SIAIAASTLD SLLDLMAGGI LWFTHLSMKS INVYKYPIGK LRVQPVGIII FAAVMATLGF QVFIQAVEKL
201: VVNEAPDKLN QVQLLWLYSI MIFATIVKLG LWLYCRTSGN KIVRAYAKDH YFDVVTNVVG LAAAVLGDRF YWWIDPIGAI VLAVYTISNW SGTVWENAVS
301: LVGESAPPEM LQKLTYLAIR HHPQIKRVDT VRAYTFGVLY FVEVDIELPE DLPLKEAHAI GESLQIKIEE LPEVERAFVH LDFECDHKPE HSILNKLPSS
401: QP
001: MEVNYCPETP LLSSNDHEAI DHKPKLTGMV SSMKSNFFAD LPQKLRSKID PENPLHLDVS KAAGLKEDEK EYYERQLATL KSFEEVESFL ARSDEYTIDE
101: KEEEEDRAER AAQELAMQIS NWANIFLLAL KIYATVKSGS IAIAASTLDS LLDLMAGGIL WFTHLSMKNV NIYKYPIGKL RVQPVGIIIF AAVMATLGFQ
201: VLLVAAEQLI SNEPSEKMNH VQLIWLYSIM LSATAIKLVL WIYCKSSRNH IVRAYAKDHH FDVVTNVLGL VAAVLANAFY WWLDPTGAIL LAIYTIVNWS
301: GTVMENAVSL IGQSAPPEVL QKLTYLVMRQ GGDNIKHVDT VRAYTFGVLY FVEVDIELPE DLPLKEAHAI GESLQIKLEE LPEVERAFVH LDFECHHKPE
401: HSVLSTIPND L
101: KEEEEDRAER AAQELAMQIS NWANIFLLAL KIYATVKSGS IAIAASTLDS LLDLMAGGIL WFTHLSMKNV NIYKYPIGKL RVQPVGIIIF AAVMATLGFQ
201: VLLVAAEQLI SNEPSEKMNH VQLIWLYSIM LSATAIKLVL WIYCKSSRNH IVRAYAKDHH FDVVTNVLGL VAAVLANAFY WWLDPTGAIL LAIYTIVNWS
301: GTVMENAVSL IGQSAPPEVL QKLTYLVMRQ GGDNIKHVDT VRAYTFGVLY FVEVDIELPE DLPLKEAHAI GESLQIKLEE LPEVERAFVH LDFECHHKPE
401: HSVLSTIPND L
Arabidopsis Description
MTPC3Cation efflux family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VEZ3]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.