Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G233300.1 | Wheat | cytosol, peroxisome, plasma membrane | 100.0 | 100.0 |
| TraesCS4A01G077100.1 | Wheat | cytosol, peroxisome, plasma membrane | 100.0 | 99.75 |
| Os03t0226400-01 | Rice | vacuole | 92.25 | 92.95 |
| Zm00001d028344_P002 | Maize | cytosol, peroxisome, plasma membrane | 92.0 | 91.54 |
| EER92593 | Sorghum | cytosol, peroxisome, plasma membrane | 90.75 | 90.98 |
| GSMUA_Achr10P... | Banana | extracellular, golgi, mitochondrion | 20.75 | 85.57 |
| HORVU4Hr1G065110.3 | Barley | cytosol, peroxisome | 99.25 | 84.65 |
| KRG98100 | Soybean | plasma membrane | 61.5 | 83.67 |
| GSMUA_Achr6P11470_001 | Banana | cytosol | 81.25 | 79.85 |
| Solyc03g052990.2.1 | Tomato | cytosol, golgi, peroxisome | 73.5 | 79.46 |
| GSMUA_Achr11P... | Banana | golgi, plasma membrane | 46.5 | 79.15 |
| PGSC0003DMT400002845 | Potato | cytosol | 74.75 | 75.7 |
| PGSC0003DMT400081988 | Potato | cytosol | 75.5 | 74.57 |
| Solyc01g006150.2.1 | Tomato | cytosol | 75.0 | 74.07 |
| VIT_06s0004g01110.t01 | Wine grape | plastid | 76.75 | 73.8 |
| Solyc12g100300.1.1 | Tomato | cytosol | 70.5 | 71.57 |
| KRH67095 | Soybean | cytosol | 71.0 | 71.36 |
| VIT_08s0007g06760.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 71.75 | 71.22 |
| PGSC0003DMT400010945 | Potato | cytosol | 73.0 | 70.53 |
| KRG95425 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 62.25 | 69.75 |
| KRH17220 | Soybean | cytosol, peroxisome, plasma membrane | 67.5 | 68.88 |
| Bra007377.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 70.25 | 68.54 |
| CDY06055 | Canola | cytosol, peroxisome, plasma membrane | 70.25 | 68.54 |
| CDX71976 | Canola | cytosol, peroxisome, plasma membrane | 70.25 | 68.54 |
| CDY67929 | Canola | cytosol | 68.5 | 67.65 |
| Bra014588.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 68.5 | 67.65 |
| CDX88969 | Canola | cytosol, peroxisome, plasma membrane | 68.5 | 67.65 |
| AT3G58060.1 | Thale cress | cytosol, peroxisome, plasma membrane | 69.5 | 67.64 |
| Bra003316.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 68.0 | 66.34 |
| CDY57242 | Canola | cytosol | 67.75 | 66.1 |
| CDY56242 | Canola | cytosol, peroxisome, plasma membrane | 67.5 | 65.85 |
| TraesCS6D01G302400.1 | Wheat | cytosol | 68.0 | 60.44 |
| KRH72855 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 63.75 | 59.86 |
| TraesCS3D01G349500.1 | Wheat | cytosol, peroxisome, plasma membrane | 48.0 | 47.52 |
| TraesCS1D01G286000.1 | Wheat | cytosol, peroxisome, plasma membrane | 48.0 | 47.17 |
| TraesCS3D01G038000.3 | Wheat | cytosol | 46.0 | 46.94 |
Protein Annotations
| Gene3D:1.20.1510.10 | MapMan:24.2.9.2.2 | Gene3D:3.30.70.1350 | InterPro:Cation_efflux | InterPro:Cation_efflux_CTD | InterPro:Cation_efflux_CTD_sf |
| InterPro:Cation_efflux_TMD_sf | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 |
| GO:GO:0008150 | GO:GO:0008324 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR027469 |
| InterPro:IPR036837 | PFAM:PF01545 | PFAM:PF16916 | PANTHER:PTHR43840 | PANTHER:PTHR43840:SF3 | SUPFAM:SSF160240 |
| SUPFAM:SSF161111 | TIGRFAMs:TIGR01297 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4D01G234400 | EnsemblPlants:TraesCS4D01G234400.1 | SEG:seg |
Description
No Description!
Coordinates
chr4D:+:394485365..394489680
Molecular Weight (calculated)
44755.1 Da
IEP (calculated)
4.979
GRAVY (calculated)
0.079
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MEANGRGGDN DAARAPLLAG RRNSVGSMRG EFVSRLPKKV LDAVDPERPS HVDFSRSKGL LEGEKEYYEK QFATLRSFEE VDSIEESNVI SEEEELMEQR
101: QSEFAMKISN YANVVLLALK IYATVKSGSI AIAASTLDSL LDLMAGGILW FTHLSMKSIN VYKYPIGKLR VQPVGIIIFA AVMATLGFQV FLQAVEKLVV
201: NVTPDKLSPP QLMWLYSIMI FATVVKLALW FYCRTSGNNI VRAYAKDHYF DVVTNVVGLA AAVLGDMFYW WIDPVGAIVL AVYTITNWSG TVWENAVSLV
301: GESAPPEMLQ KLTYLAIRHD PQIKRVDTVR AYTFGVLYFV EVDIELPEDL PLKEAHAIGE SLQIKIEELP EVERAFVHLD FECDHKPEHS ILSKLPSSQP
101: QSEFAMKISN YANVVLLALK IYATVKSGSI AIAASTLDSL LDLMAGGILW FTHLSMKSIN VYKYPIGKLR VQPVGIIIFA AVMATLGFQV FLQAVEKLVV
201: NVTPDKLSPP QLMWLYSIMI FATVVKLALW FYCRTSGNNI VRAYAKDHYF DVVTNVVGLA AAVLGDMFYW WIDPVGAIVL AVYTITNWSG TVWENAVSLV
301: GESAPPEMLQ KLTYLAIRHD PQIKRVDTVR AYTFGVLYFV EVDIELPEDL PLKEAHAIGE SLQIKIEELP EVERAFVHLD FECDHKPEHS ILSKLPSSQP
001: MEVNYCPETP LLSSNDHEAI DHKPKLTGMV SSMKSNFFAD LPQKLRSKID PENPLHLDVS KAAGLKEDEK EYYERQLATL KSFEEVESFL ARSDEYTIDE
101: KEEEEDRAER AAQELAMQIS NWANIFLLAL KIYATVKSGS IAIAASTLDS LLDLMAGGIL WFTHLSMKNV NIYKYPIGKL RVQPVGIIIF AAVMATLGFQ
201: VLLVAAEQLI SNEPSEKMNH VQLIWLYSIM LSATAIKLVL WIYCKSSRNH IVRAYAKDHH FDVVTNVLGL VAAVLANAFY WWLDPTGAIL LAIYTIVNWS
301: GTVMENAVSL IGQSAPPEVL QKLTYLVMRQ GGDNIKHVDT VRAYTFGVLY FVEVDIELPE DLPLKEAHAI GESLQIKLEE LPEVERAFVH LDFECHHKPE
401: HSVLSTIPND L
101: KEEEEDRAER AAQELAMQIS NWANIFLLAL KIYATVKSGS IAIAASTLDS LLDLMAGGIL WFTHLSMKNV NIYKYPIGKL RVQPVGIIIF AAVMATLGFQ
201: VLLVAAEQLI SNEPSEKMNH VQLIWLYSIM LSATAIKLVL WIYCKSSRNH IVRAYAKDHH FDVVTNVLGL VAAVLANAFY WWLDPTGAIL LAIYTIVNWS
301: GTVMENAVSL IGQSAPPEVL QKLTYLVMRQ GGDNIKHVDT VRAYTFGVLY FVEVDIELPE DLPLKEAHAI GESLQIKLEE LPEVERAFVH LDFECHHKPE
401: HSVLSTIPND L
Arabidopsis Description
MTPC3Cation efflux family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VEZ3]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.