Factsheet for GSMUA_Achr6P11470_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
vacuole 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion	22.36	93.81
GSMUA_Achr11P...	Banana	golgi, plasma membrane	50.61	87.66
KRG98100	Soybean	plasma membrane	61.92	85.71
Os03t0226400-01	Rice	vacuole	80.84	82.87
TraesCS4B01G233300.1	Wheat	cytosol, peroxisome, plasma membrane	79.85	81.25
TraesCS4D01G234400.1	Wheat	cytosol, peroxisome, plasma membrane	79.85	81.25
EER92593	Sorghum	cytosol, peroxisome, plasma membrane	79.61	81.2
TraesCS4A01G077100.1	Wheat	cytosol, peroxisome, plasma membrane	79.85	81.05
Zm00001d028344_P002	Maize	cytosol, peroxisome, plasma membrane	79.61	80.6
Solyc03g052990.2.1	Tomato	cytosol, golgi, peroxisome	71.74	78.92
PGSC0003DMT400002845	Potato	cytosol	73.46	75.7
PGSC0003DMT400081988	Potato	cytosol	74.2	74.57
GSMUA_Achr10P...	Banana	cytosol	31.2	73.84
Solyc01g006150.2.1	Tomato	cytosol	73.22	73.58
VIT_08s0007g06760.t01	Wine grape	cytosol, peroxisome, plasma membrane	72.73	73.45
VIT_06s0004g01110.t01	Wine grape	plastid	74.69	73.08
Solyc12g100300.1.1	Tomato	cytosol	70.52	72.84
KRH67095	Soybean	cytosol	70.76	72.36
PGSC0003DMT400010945	Potato	cytosol	72.73	71.5
KRG95425	Soybean	endoplasmic reticulum, golgi, plasma membrane	62.16	70.87
KRH17220	Soybean	cytosol, peroxisome, plasma membrane	68.06	70.66
HORVU4Hr1G065110.3	Barley	cytosol, peroxisome	80.34	69.72
CDY06055	Canola	cytosol, peroxisome, plasma membrane	70.02	69.51
Bra007377.1-P	Field mustard	cytosol, peroxisome, plasma membrane	70.02	69.51
CDX71976	Canola	cytosol, peroxisome, plasma membrane	69.78	69.27
CDX88969	Canola	cytosol, peroxisome, plasma membrane	68.3	68.64
Bra014588.1-P	Field mustard	cytosol, peroxisome, plasma membrane	68.3	68.64
CDY67929	Canola	cytosol	67.81	68.15
AT3G58060.1	Thale cress	cytosol, peroxisome, plasma membrane	68.55	67.88
CDY57242	Canola	cytosol	67.08	66.59
Bra003316.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.83	66.34
CDY56242	Canola	cytosol, peroxisome, plasma membrane	66.83	66.34
GSMUA_Achr11P...	Banana	cytosol	42.01	62.87
KRH72855	Soybean	cytosol, endoplasmic reticulum, peroxisome	62.65	59.86
GSMUA_Achr9P03180_001	Banana	cytosol, peroxisome, plasma membrane	47.17	48.61
GSMUA_Achr10P...	Banana	peroxisome	44.72	48.02
GSMUA_Achr6P09720_001	Banana	peroxisome	44.72	46.43
GSMUA_Achr8P18410_001	Banana	cytosol	45.7	46.15
GSMUA_Achr5P29180_001	Banana	plasma membrane	48.16	43.36

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.2	Gene3D:3.30.70.1350	InterPro:Cation_efflux	InterPro:Cation_efflux_CTD	InterPro:Cation_efflux_CTD_sf
InterPro:Cation_efflux_TMD_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0008324	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0098655
EnsemblPlantsGene:GSMUA_Achr6G11470_001	EnsemblPlants:GSMUA_Achr6P11470_001	EnsemblPlants:GSMUA_Achr6T11470_001	InterPro:IPR027469	InterPro:IPR036837	UniProt:M0T645
PFAM:PF01545	PFAM:PF16916	PANTHER:PTHR43840	PANTHER:PTHR43840:SF3	SUPFAM:SSF160240	SUPFAM:SSF161111
TIGRFAMs:TIGR01297	TMHMM:TMhelix	UniParc:UPI000294F74A	SEG:seg	:	:

Description

Putative metal tolerance protein C3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G11470_001]

Coordinates

chr6:+:7613551..7616757

Molecular Weight (calculated)

45827.6 Da

IEP (calculated)

6.075

GRAVY (calculated)

0.042

Length

407 amino acids

Sequence
(BLAST)

001: MAGGENGRAE EENEVRAPLL AAVRRVARKN SVNSMRGEFV ARLPEKVKHG VDPERPFTID VSRTRDLLEG EKEYYEKQFA TLRSFEEVDS LNTPNVVDEA
101: LDLEEQRQSE FAMKISNYAN IALLALKIYA TIRSGSIAIA ASTLDSLLDL MAGGILWFTH LSMKNINIYK YPIGKLRVQP VGIIVFAAIM ATLGFQVFVQ
201: ALERLIENKP ADKMTSAQLV WLYSIMLTAT FVKLALWLYC RASGNKIVRA YAKDHYFDVV TNVLGLAAAI LGDKFYWWID PAGAIILAIY TITNWSGTVW
301: ENAVSLVGQS APPEMLQKLT YLVIRHHPRI KRVDTVRAYT FGVLYFVEVD IELPEDLPLK EAHAIGESLQ IKIEELPEVE RAFVHLDFEC DHKPEHSILV
401: KLPSSQA

Best Arabidopsis Sequence Match ( AT3G58060.1 )
(BLAST)

001: MEVNYCPETP LLSSNDHEAI DHKPKLTGMV SSMKSNFFAD LPQKLRSKID PENPLHLDVS KAAGLKEDEK EYYERQLATL KSFEEVESFL ARSDEYTIDE
101: KEEEEDRAER AAQELAMQIS NWANIFLLAL KIYATVKSGS IAIAASTLDS LLDLMAGGIL WFTHLSMKNV NIYKYPIGKL RVQPVGIIIF AAVMATLGFQ
201: VLLVAAEQLI SNEPSEKMNH VQLIWLYSIM LSATAIKLVL WIYCKSSRNH IVRAYAKDHH FDVVTNVLGL VAAVLANAFY WWLDPTGAIL LAIYTIVNWS
301: GTVMENAVSL IGQSAPPEVL QKLTYLVMRQ GGDNIKHVDT VRAYTFGVLY FVEVDIELPE DLPLKEAHAI GESLQIKLEE LPEVERAFVH LDFECHHKPE
401: HSVLSTIPND L

Arabidopsis Description

MTPC3Cation efflux family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VEZ3]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.