Factsheet for PGSC0003DMT400081988

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g006150.2.1	Tomato	cytosol	98.27	98.27
KRG98100	Soybean	plasma membrane	61.73	85.03
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion	20.0	83.51
PGSC0003DMT400010945	Potato	cytosol	78.52	76.81
GSMUA_Achr11P...	Banana	golgi, plasma membrane	44.44	76.6
TraesCS4B01G233300.1	Wheat	cytosol, peroxisome, plasma membrane	74.57	75.5
TraesCS4D01G234400.1	Wheat	cytosol, peroxisome, plasma membrane	74.57	75.5
TraesCS4A01G077100.1	Wheat	cytosol, peroxisome, plasma membrane	74.57	75.31
Os03t0226400-01	Rice	vacuole	73.58	75.06
Os02t0775100-01	Rice	plasma membrane	37.78	75.0
GSMUA_Achr6P11470_001	Banana	cytosol	74.57	74.2
PGSC0003DMT400002845	Potato	cytosol	72.35	74.18
VIT_06s0004g01110.t01	Wine grape	plastid	76.05	74.04
EER92593	Sorghum	cytosol, peroxisome, plasma membrane	72.84	73.93
Zm00001d028344_P002	Maize	cytosol, peroxisome, plasma membrane	72.84	73.38
CDX71976	Canola	cytosol, peroxisome, plasma membrane	69.38	68.54
KRH17220	Soybean	cytosol, peroxisome, plasma membrane	66.17	68.37
Bra007377.1-P	Field mustard	cytosol, peroxisome, plasma membrane	69.14	68.29
CDY06055	Canola	cytosol, peroxisome, plasma membrane	69.14	68.29
Bra014588.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.65	67.65
CDY67929	Canola	cytosol	67.65	67.65
CDX88969	Canola	cytosol, peroxisome, plasma membrane	67.65	67.65
AT3G58060.1	Thale cress	cytosol, peroxisome, plasma membrane	67.16	66.18
TraesCS6B01G353300.1	Wheat	cytosol	66.91	66.1
TraesCS6A01G322500.1	Wheat	cytosol	66.42	65.61
HORVU4Hr1G065110.3	Barley	cytosol, peroxisome	75.31	65.03
Bra003316.1-P	Field mustard	cytosol, peroxisome, plasma membrane	65.43	64.63
CDY56242	Canola	cytosol, peroxisome, plasma membrane	65.43	64.63
CDY57242	Canola	cytosol	65.19	64.39
KXG31199	Sorghum	peroxisome	66.17	61.75
TraesCS6D01G302400.1	Wheat	cytosol	66.42	59.78
KRH72855	Soybean	cytosol, endoplasmic reticulum, peroxisome	62.47	59.39
Zm00001d018242_P001	Maize	cytosol	65.43	58.5
GSMUA_Achr10P...	Banana	cytosol	23.95	56.4
HORVU6Hr1G078910.2	Barley	cytosol	56.79	53.86
PGSC0003DMT400060460	Potato	cytosol, peroxisome, plasma membrane	49.14	49.63
GSMUA_Achr11P...	Banana	cytosol	32.35	48.16
PGSC0003DMT400029243	Potato	cytosol, peroxisome, plasma membrane	48.89	44.1
PGSC0003DMT400024996	Potato	cytosol, peroxisome, plasma membrane, plastid	34.32	39.49

Protein Annotations

Gene3D:1.20.1510.10	EntrezGene:102582321	MapMan:24.2.9.2.2	Gene3D:3.30.70.1350	InterPro:Cation_efflux	InterPro:Cation_efflux_CTD
InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006812	GO:GO:0008150	GO:GO:0008324	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
GO:GO:0098655	InterPro:IPR027469	InterPro:IPR036837	UniProt:M1D5E8	PFAM:PF01545	PFAM:PF16916
EnsemblPlantsGene:PGSC0003DMG400032189	PGSC:PGSC0003DMG400032189	EnsemblPlants:PGSC0003DMT400081988	PANTHER:PTHR43840	PANTHER:PTHR43840:SF3	SUPFAM:SSF160240
SUPFAM:SSF161111	TIGRFAMs:TIGR01297	TMHMM:TMhelix	UniParc:UPI000296ED99	RefSeq:XP_006354172.1	SEG:seg

Description

Metal tolerance protein [Source:PGSC_GENE;Acc:PGSC0003DMG400032189]

Coordinates

chr1:-:1642148..1648615

Molecular Weight (calculated)

45431.7 Da

IEP (calculated)

4.825

GRAVY (calculated)

0.025

Length

405 amino acids

Sequence
(BLAST)

001: MEGEEIKNEV KTPLLDGWKL SYSGRRNSVT TLRGDFLARL PEKVKSCVNV DVESSSSNID NTKSSSLSKG EKDYYEKQFE TLKSFEEVDS IVASSFIDDE
101: GLDEQSQDER AMQISNYANV LLLALKIYAT VTSGSLAIAA STLDSLLDLM AGGILWLSHL SMKNINIYKY PIGKLRVQPV GIIIFAAVMA TLGFQVFIQA
201: VEQLVKNESP DKMTSDQLFW LYTIMITATV VKLALWLYCR SSGNNIVRAY AKDHYFDVVT NVVGLVAAIL GDKFYWWIDP VGAIILALYT ITNWSGTVLE
301: NAVSLVGQSA PPEYLQKLTY LVIRHPQVKR IDTVRAYTFG VLYFVEVDIE LPEDLPLKEA HAIGETLQIK LEKLPEVERA FVHLDFECEH KPEHSVLSRL
401: PNTEP

Best Arabidopsis Sequence Match ( AT3G58060.1 )
(BLAST)

001: MEVNYCPETP LLSSNDHEAI DHKPKLTGMV SSMKSNFFAD LPQKLRSKID PENPLHLDVS KAAGLKEDEK EYYERQLATL KSFEEVESFL ARSDEYTIDE
101: KEEEEDRAER AAQELAMQIS NWANIFLLAL KIYATVKSGS IAIAASTLDS LLDLMAGGIL WFTHLSMKNV NIYKYPIGKL RVQPVGIIIF AAVMATLGFQ
201: VLLVAAEQLI SNEPSEKMNH VQLIWLYSIM LSATAIKLVL WIYCKSSRNH IVRAYAKDHH FDVVTNVLGL VAAVLANAFY WWLDPTGAIL LAIYTIVNWS
301: GTVMENAVSL IGQSAPPEVL QKLTYLVMRQ GGDNIKHVDT VRAYTFGVLY FVEVDIELPE DLPLKEAHAI GESLQIKLEE LPEVERAFVH LDFECHHKPE
401: HSVLSTIPND L

Arabidopsis Description

MTPC3Cation efflux family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VEZ3]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.