Factsheet for HORVU6Hr1G078910.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G353300.1	Wheat	cytosol	82.44	85.85
TraesCS6A01G322500.1	Wheat	cytosol	81.97	85.37
TraesCS6D01G302400.1	Wheat	cytosol	81.73	77.56
KXG31199	Sorghum	peroxisome	72.6	71.43
Zm00001d018242_P001	Maize	cytosol	71.43	67.33
Os02t0775100-01	Rice	plasma membrane	30.91	64.71
KRG98100	Soybean	plasma membrane	43.56	63.27
Solyc03g052990.2.1	Tomato	cytosol, golgi, peroxisome	52.69	60.81
PGSC0003DMT400002845	Potato	cytosol	54.33	58.73
Solyc12g100300.1.1	Tomato	cytosol	52.93	57.36
VIT_08s0007g06760.t01	Wine grape	cytosol, peroxisome, plasma membrane	54.1	57.32
PGSC0003DMT400081988	Potato	cytosol	53.86	56.79
VIT_06s0004g01110.t01	Wine grape	plastid	55.27	56.73
Solyc01g006150.2.1	Tomato	cytosol	53.63	56.54
PGSC0003DMT400010945	Potato	cytosol	54.8	56.52
KRH67095	Soybean	cytosol	51.76	55.53
CDY06055	Canola	cytosol, peroxisome, plasma membrane	52.22	54.39
CDX71976	Canola	cytosol, peroxisome, plasma membrane	52.22	54.39
Bra007377.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.22	54.39
AT3G58060.1	Thale cress	cytosol, peroxisome, plasma membrane	51.29	53.28
GSMUA_Achr10P...	Banana	cytosol	21.31	52.91
KRG95425	Soybean	endoplasmic reticulum, golgi, plasma membrane	44.03	52.66
CDX88969	Canola	cytosol, peroxisome, plasma membrane	49.88	52.59
Bra014588.1-P	Field mustard	cytosol, peroxisome, plasma membrane	49.88	52.59
Bra003316.1-P	Field mustard	cytosol, peroxisome, plasma membrane	50.35	52.44
KRH17220	Soybean	cytosol, peroxisome, plasma membrane	48.01	52.3
CDY57242	Canola	cytosol	50.12	52.2
CDY56242	Canola	cytosol, peroxisome, plasma membrane	50.12	52.2
CDY67929	Canola	cytosol	49.41	52.1
HORVU4Hr1G065110.3	Barley	cytosol, peroxisome	56.21	51.17
GSMUA_Achr11P...	Banana	cytosol	29.51	46.32
KRH72855	Soybean	cytosol, endoplasmic reticulum, peroxisome	44.96	45.07
HORVU3Hr1G086970.1	Barley	cytosol, peroxisome, plasma membrane	37.7	40.35
HORVU1Hr1G071930.2	Barley	cytosol	38.17	40.35

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.2	UniProt:A0A287UU57	InterPro:Cation_efflux	InterPro:Cation_efflux_TMD_sf	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008324
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0098655	EnsemblPlantsGene:HORVU6Hr1G078910	EnsemblPlants:HORVU6Hr1G078910.2
InterPro:IPR027469	PFAM:PF01545	PANTHER:PTHR43840	PANTHER:PTHR43840:SF7	SUPFAM:SSF161111	TMHMM:TMhelix
UniParc:UPI000B4691D9	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:536280748..536282630

Molecular Weight (calculated)

47537.3 Da

IEP (calculated)

9.599

GRAVY (calculated)

-0.099

Length

427 amino acids

Sequence
(BLAST)

001: MEGDDGSAPL LANGAGAGRP SLRRRDSARS LRSSFLRRLP HKMRTELDPE RGADVDVSRV KDLSQGEREY YRKQLAALQT FEEVEALCMP GEFGSDDDPG
101: ASDADDEEQK QSEFAMKISN YANIVLLAFK VYATIRTGSM AIAASTLDSL LDLMAGGILW FTHLSMKKVN IYKYPIGKLR VQPVGIIVFA AIMATLGFQV
201: LVQAIEQLVE NEPGDKLTSE QLIWLYSIML SATAVKLALW FYCRSSGNSI VRAYAKDHYF DVITNVVGLV AAVLGDRFLW WIDPAGAVLL AVYTIANWSG
301: TVLEQAVSLV GRSAPPEMLQ MLTYLAMKHD ARVQRVDTVR AYSFGALYFV EVSPWPHRQS MRLKIFTSER SYIWGAFFSG SGVRLTSSSR RTCGCGRRTP
401: SGSRCRRGSR SCRRWSGRLS MWTSRAP

Best Arabidopsis Sequence Match ( AT1G79520.2 )
(BLAST)

001: MAATEHRGLS GGDYNVDLLP IDQDDSPPSS WRLSLDTFRL PSSSPLSSGR HNGRTRLSRY LRTPSKFLFL VLVLNLQKER KVSEYYKQQE KLLEGFNEME
101: TINETGFVSG APTEEELKKL AKSERLAVHI SNAANLVLFV AKVYASVESR SMAVIASTLD SLLDLLSGFI LWFTANAMRT PNNFRYPIGK RRMQPVGIIV
201: FASVMATLGL QVILESTRLL VSKNGSHMSS TEEKWMIGIM ASATVVKFLL MLYCRSFQNE IVRAYAQDHL FDVITNSVGL ATAVLAVKFY WWIDPSGAIL
301: IALYTISTWA RTVLENVHSL IGRSAPPDFL AKLTFLIWNH HEKIKHIDTV RAYTFGSHYF VEVDIVLPED MRLHEAHNIG ETLQEKLEQL SEVERAFVHI
401: DFEFTHRPEH KCKV

Arabidopsis Description

Cation efflux family protein [Source:UniProtKB/TrEMBL;Acc:F4IF62]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.