CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06055	Canola	cytosol, peroxisome, plasma membrane	98.29	98.29
CDX88969	Canola	cytosol, peroxisome, plasma membrane	86.83	87.9
CDY67929	Canola	cytosol	86.59	87.65
CDY56242	Canola	cytosol, peroxisome, plasma membrane	86.59	86.59
CDY57242	Canola	cytosol	86.34	86.34
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion	19.51	82.47
KRG98100	Soybean	plasma membrane	58.29	81.29
GSMUA_Achr11P...	Banana	golgi, plasma membrane	41.95	73.19
Solyc12g100300.1.1	Tomato	cytosol	68.05	70.81
Os03t0226400-01	Rice	vacuole	68.29	70.53
TraesCS4B01G233300.1	Wheat	cytosol, peroxisome, plasma membrane	68.54	70.25
TraesCS4D01G234400.1	Wheat	cytosol, peroxisome, plasma membrane	68.54	70.25
TraesCS4A01G077100.1	Wheat	cytosol, peroxisome, plasma membrane	68.54	70.07
GSMUA_Achr6P11470_001	Banana	cytosol	69.27	69.78
PGSC0003DMT400081988	Potato	cytosol	68.54	69.38
Solyc01g006150.2.1	Tomato	cytosol	68.54	69.38
EER92593	Sorghum	cytosol, peroxisome, plasma membrane	67.32	69.17
Os02t0775100-01	Rice	plasma membrane	34.39	69.12
Zm00001d028344_P002	Maize	cytosol, peroxisome, plasma membrane	67.56	68.91
VIT_06s0004g01110.t01	Wine grape	plastid	69.76	68.75
KRH17220	Soybean	cytosol, peroxisome, plasma membrane	65.37	68.37
PGSC0003DMT400010945	Potato	cytosol	69.02	68.36
TraesCS6B01G353300.1	Wheat	cytosol	62.93	62.93
CDY20436	Canola	endoplasmic reticulum, extracellular	18.78	62.6
CDY20439	Canola	endoplasmic reticulum, extracellular	18.78	62.6
TraesCS6A01G322500.1	Wheat	cytosol	62.2	62.2
CDY51006	Canola	golgi, plasma membrane	32.2	60.55
KRH72855	Soybean	cytosol, endoplasmic reticulum, peroxisome	62.68	60.33
HORVU4Hr1G065110.3	Barley	cytosol, peroxisome	68.05	59.49
KXG31199	Sorghum	peroxisome	61.95	58.53
TraesCS6D01G302400.1	Wheat	cytosol	62.2	56.67
Zm00001d018242_P001	Maize	cytosol	61.71	55.85
GSMUA_Achr10P...	Banana	cytosol	22.2	52.91
HORVU6Hr1G078910.2	Barley	cytosol	54.39	52.22
CDX88546	Canola	cytosol	48.05	49.01
CDX87376	Canola	cytosol	47.8	48.76
CDX81760	Canola	plasma membrane	45.12	48.68
CDY61375	Canola	golgi	25.37	48.6
CDY53587	Canola	cytosol, nucleus, peroxisome	45.61	47.83
CDY33342	Canola	cytosol, peroxisome, plasma membrane, plastid	46.59	47.75
CDY35081	Canola	cytosol, peroxisome, plasma membrane, plastid	46.59	47.75
CDY07013	Canola	cytosol	45.12	46.72
CDX93260	Canola	cytosol	44.88	46.46
GSMUA_Achr11P...	Banana	cytosol	29.76	44.85
CDY20438	Canola	cytosol	21.22	37.66
CDY20435	Canola	cytosol, mitochondrion, nucleus, peroxisome	21.46	32.59
CDX88395	Canola	endoplasmic reticulum, extracellular	7.56	22.63

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.2	Gene3D:3.30.70.1350	GO:A0A078C4P5	EnsemblPlants:CDX71976	ProteinID:CDX71976
ProteinID:CDX71976.1	InterPro:Cation_efflux	InterPro:Cation_efflux_CTD	InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008324
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00155745001	InterPro:IPR027469	InterPro:IPR036837
PFAM:PF01545	PFAM:PF16916	PANTHER:PTHR43840	PANTHER:PTHR43840:SF3	SUPFAM:SSF160240	SUPFAM:SSF161111
TIGRFAMs:TIGR01297	TMHMM:TMhelix	UniParc:UPI0004EDF926	SEG:seg	:	:

Description

BnaC08g28980D

Coordinates

chrLK031795:+:1593940..1595937

Molecular Weight (calculated)

46277.1 Da

IEP (calculated)

5.804

GRAVY (calculated)

0.033

Length

410 amino acids

Sequence
(BLAST)

001: MEVNSTKTPL LWSKDHEAEI QKPKVASNVS TMKSNFFTDL PHKLRSKIDP EDPYDIDISK AVGLKKGKKE YYERQLATLK SFEEVESFVA RSEKYVMDEQ
101: SQVEDQAERA AQERAMQISN WANIFLLALK IYATIKSGSI AVAASTLDSL LDLMAGGILW FTHLSMKNIN IYKYPIGKLR VQPVGIIIFA AVMATLGFQV
201: LLEAAEQLIK NEPSEKMSHD QLVWLCSIML SATVIKLVLW IYCRSSRNHI VRAYAKDHYF DVVTNVLGLV AAVLGNAFYW WIDPAGAIVL AIYTIINWSG
301: TVMENAVSLI GQSAPPEVLQ KLTYLVLRQG ADNIKRVDTV RAYTFGVLYF VEVDIELPED LPLKEAHAIG ESLQIKLEEL PEVERAFVHL DFECHHKPEH
401: SIFSTIPNDL

Best Arabidopsis Sequence Match ( AT3G58060.1 )
(BLAST)

001: MEVNYCPETP LLSSNDHEAI DHKPKLTGMV SSMKSNFFAD LPQKLRSKID PENPLHLDVS KAAGLKEDEK EYYERQLATL KSFEEVESFL ARSDEYTIDE
101: KEEEEDRAER AAQELAMQIS NWANIFLLAL KIYATVKSGS IAIAASTLDS LLDLMAGGIL WFTHLSMKNV NIYKYPIGKL RVQPVGIIIF AAVMATLGFQ
201: VLLVAAEQLI SNEPSEKMNH VQLIWLYSIM LSATAIKLVL WIYCKSSRNH IVRAYAKDHH FDVVTNVLGL VAAVLANAFY WWLDPTGAIL LAIYTIVNWS
301: GTVMENAVSL IGQSAPPEVL QKLTYLVMRQ GGDNIKHVDT VRAYTFGVLY FVEVDIELPE DLPLKEAHAI GESLQIKLEE LPEVERAFVH LDFECHHKPE
401: HSVLSTIPND L

Arabidopsis Description

MTPC3Cation efflux family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VEZ3]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.