Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G353300.1 | Wheat | cytosol | 99.02 | 99.02 |
| TraesCS6D01G302400.1 | Wheat | cytosol | 98.78 | 90.0 |
| Os02t0775100-01 | Rice | plasma membrane | 41.95 | 84.31 |
| HORVU6Hr1G078910.2 | Barley | cytosol | 85.37 | 81.97 |
| KXG31199 | Sorghum | peroxisome | 84.39 | 79.72 |
| Zm00001d018242_P001 | Maize | cytosol | 84.39 | 76.38 |
| KRG98100 | Soybean | plasma membrane | 54.15 | 75.51 |
| Solyc03g052990.2.1 | Tomato | cytosol, golgi, peroxisome | 63.17 | 70.0 |
| TraesCS4A01G077100.1 | Wheat | cytosol, peroxisome, plasma membrane | 67.07 | 68.58 |
| PGSC0003DMT400002845 | Potato | cytosol | 64.88 | 67.34 |
| Solyc12g100300.1.1 | Tomato | cytosol | 63.9 | 66.5 |
| PGSC0003DMT400081988 | Potato | cytosol | 65.61 | 66.42 |
| Solyc01g006150.2.1 | Tomato | cytosol | 65.37 | 66.17 |
| VIT_08s0007g06760.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 64.88 | 66.0 |
| PGSC0003DMT400010945 | Potato | cytosol | 66.1 | 65.46 |
| VIT_06s0004g01110.t01 | Wine grape | plastid | 66.1 | 65.14 |
| KRH67095 | Soybean | cytosol | 63.17 | 65.08 |
| KRG95425 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 55.12 | 63.31 |
| CDY06055 | Canola | cytosol, peroxisome, plasma membrane | 62.2 | 62.2 |
| CDX71976 | Canola | cytosol, peroxisome, plasma membrane | 62.2 | 62.2 |
| Bra007377.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 62.2 | 62.2 |
| KRH17220 | Soybean | cytosol, peroxisome, plasma membrane | 59.02 | 61.73 |
| AT3G58060.1 | Thale cress | cytosol, peroxisome, plasma membrane | 61.71 | 61.56 |
| CDX88969 | Canola | cytosol, peroxisome, plasma membrane | 60.0 | 60.74 |
| Bra014588.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 60.0 | 60.74 |
| Bra003316.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 60.49 | 60.49 |
| CDY57242 | Canola | cytosol | 60.49 | 60.49 |
| CDY56242 | Canola | cytosol, peroxisome, plasma membrane | 60.49 | 60.49 |
| CDY67929 | Canola | cytosol | 59.51 | 60.25 |
| GSMUA_Achr10P... | Banana | cytosol | 22.44 | 53.49 |
| KRH72855 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 55.12 | 53.05 |
| TraesCS1A01G287100.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.59 | 46.93 |
| GSMUA_Achr11P... | Banana | cytosol | 30.98 | 46.69 |
| TraesCS3A01G355500.2 | Wheat | cytosol, peroxisome, plasma membrane | 45.37 | 46.04 |
| TraesCS3A01G042600.1 | Wheat | cytosol, peroxisome, plasma membrane | 43.17 | 45.27 |
Protein Annotations
| Gene3D:1.20.1510.10 | MapMan:24.2.9.2.2 | Gene3D:3.30.70.1350 | InterPro:Cation_efflux | InterPro:Cation_efflux_CTD | InterPro:Cation_efflux_CTD_sf |
| InterPro:Cation_efflux_TMD_sf | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 |
| GO:GO:0008150 | GO:GO:0008324 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR027469 |
| InterPro:IPR036837 | PFAM:PF01545 | PFAM:PF16916 | PANTHER:PTHR43840 | PANTHER:PTHR43840:SF7 | SUPFAM:SSF160240 |
| SUPFAM:SSF161111 | TIGRFAMs:TIGR01297 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6A01G322500 | EnsemblPlants:TraesCS6A01G322500.1 | SEG:seg |
Description
No Description!
Coordinates
chr6A:-:556551408..556553194
Molecular Weight (calculated)
45864.0 Da
IEP (calculated)
4.945
GRAVY (calculated)
-0.111
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGDDRSAPL LANGAGRPSL RRRDSARSLR SSFLRRLPDK MRTELDPERG ADVDVARVKD LSQGEREYYR KQLAALRTFE EVEALCMPGE FGSDDDGDPD
101: ADDADDEEQK QSEFAMKISN YANIVLLAFK VYATIRTGSM AIAASTLDSL LDLMAGGILW FTHLSMKKVN IYKYPIGKLR VQPVGIIVFA AIMATLGFQV
201: LVQAIEQLVE NEPGDKLTSE QLTWLYSIML SATAVKLALW FYCRSSGNSI VRAYAKDHYF DVITNVVGLV AAVLGDRFLW WIDPAGAVLL AVYTIANWSG
301: TVLEQAVSLV GRSAPPEMLQ MLTYLAMKHD ARVQRVDTVR AYSFGALYFV EVDIELSEDM RLREAHAIGE SLQERIEKLP EVERAFVHAD FESTHKPEHT
401: VRSRLPATEP
101: ADDADDEEQK QSEFAMKISN YANIVLLAFK VYATIRTGSM AIAASTLDSL LDLMAGGILW FTHLSMKKVN IYKYPIGKLR VQPVGIIVFA AIMATLGFQV
201: LVQAIEQLVE NEPGDKLTSE QLTWLYSIML SATAVKLALW FYCRSSGNSI VRAYAKDHYF DVITNVVGLV AAVLGDRFLW WIDPAGAVLL AVYTIANWSG
301: TVLEQAVSLV GRSAPPEMLQ MLTYLAMKHD ARVQRVDTVR AYSFGALYFV EVDIELSEDM RLREAHAIGE SLQERIEKLP EVERAFVHAD FESTHKPEHT
401: VRSRLPATEP
001: MAATEHRGLS GGDYNVDLLP IDQDDSPPSS WRLSLDTFRL PSSSPLSSGR HNGRTRLSRY LRTPSKFLFL VLVLNLQKER KVSEYYKQQE KLLEGFNEME
101: TINETGFVSG APTEEELKKL AKSERLAVHI SNAANLVLFV AKVYASVESR SMAVIASTLD SLLDLLSGFI LWFTANAMRT PNNFRYPIGK RRMQPVGIIV
201: FASVMATLGL QVILESTRLL VSKNGSHMSS TEEKWMIGIM ASATVVKFLL MLYCRSFQNE IVRAYAQDHL FDVITNSVGL ATAVLAVKFY WWIDPSGAIL
301: IALYTISTWA RTVLENVHSL IGRSAPPDFL AKLTFLIWNH HEKIKHIDTV RAYTFGSHYF VEVDIVLPED MRLHEAHNIG ETLQEKLEQL SEVERAFVHI
401: DFEFTHRPEH KCKV
101: TINETGFVSG APTEEELKKL AKSERLAVHI SNAANLVLFV AKVYASVESR SMAVIASTLD SLLDLLSGFI LWFTANAMRT PNNFRYPIGK RRMQPVGIIV
201: FASVMATLGL QVILESTRLL VSKNGSHMSS TEEKWMIGIM ASATVVKFLL MLYCRSFQNE IVRAYAQDHL FDVITNSVGL ATAVLAVKFY WWIDPSGAIL
301: IALYTISTWA RTVLENVHSL IGRSAPPDFL AKLTFLIWNH HEKIKHIDTV RAYTFGSHYF VEVDIVLPED MRLHEAHNIG ETLQEKLEQL SEVERAFVHI
401: DFEFTHRPEH KCKV
Arabidopsis Description
Cation efflux family protein [Source:UniProtKB/TrEMBL;Acc:F4IF62]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.