Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G322500.1 | Wheat | cytosol | 99.02 | 99.02 |
| TraesCS6D01G302400.1 | Wheat | cytosol | 98.78 | 90.0 |
| Os02t0775100-01 | Rice | plasma membrane | 42.44 | 85.29 |
| HORVU6Hr1G078910.2 | Barley | cytosol | 85.85 | 82.44 |
| KXG31199 | Sorghum | peroxisome | 84.88 | 80.18 |
| Zm00001d018242_P001 | Maize | cytosol | 84.88 | 76.82 |
| KRG98100 | Soybean | plasma membrane | 54.63 | 76.19 |
| Solyc03g052990.2.1 | Tomato | cytosol, golgi, peroxisome | 63.41 | 70.27 |
| TraesCS4B01G233300.1 | Wheat | cytosol, peroxisome, plasma membrane | 67.07 | 68.75 |
| PGSC0003DMT400002845 | Potato | cytosol | 65.37 | 67.85 |
| Solyc12g100300.1.1 | Tomato | cytosol | 64.39 | 67.01 |
| PGSC0003DMT400081988 | Potato | cytosol | 66.1 | 66.91 |
| Solyc01g006150.2.1 | Tomato | cytosol | 65.85 | 66.67 |
| VIT_08s0007g06760.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 64.88 | 66.0 |
| PGSC0003DMT400010945 | Potato | cytosol | 66.59 | 65.94 |
| VIT_06s0004g01110.t01 | Wine grape | plastid | 66.83 | 65.87 |
| KRH67095 | Soybean | cytosol | 62.68 | 64.57 |
| CDY06055 | Canola | cytosol, peroxisome, plasma membrane | 62.93 | 62.93 |
| CDX71976 | Canola | cytosol, peroxisome, plasma membrane | 62.93 | 62.93 |
| Bra007377.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 62.93 | 62.93 |
| KRG95425 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 54.63 | 62.75 |
| AT3G58060.1 | Thale cress | cytosol, peroxisome, plasma membrane | 62.44 | 62.29 |
| KRH17220 | Soybean | cytosol, peroxisome, plasma membrane | 59.51 | 62.24 |
| CDX88969 | Canola | cytosol, peroxisome, plasma membrane | 60.73 | 61.48 |
| Bra014588.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 60.73 | 61.48 |
| CDY67929 | Canola | cytosol | 60.24 | 60.99 |
| Bra003316.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 60.98 | 60.98 |
| CDY57242 | Canola | cytosol | 60.98 | 60.98 |
| CDY56242 | Canola | cytosol, peroxisome, plasma membrane | 60.98 | 60.98 |
| KRH72855 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 55.61 | 53.52 |
| GSMUA_Achr10P... | Banana | cytosol | 22.2 | 52.91 |
| TraesCS1B01G296500.1 | Wheat | cytosol, peroxisome, plasma membrane | 47.07 | 47.3 |
| TraesCS3B01G388400.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.1 | 46.78 |
| GSMUA_Achr11P... | Banana | cytosol | 30.98 | 46.69 |
| TraesCS3B01G040900.3 | Wheat | cytosol, peroxisome, plasma membrane | 44.15 | 46.06 |
Protein Annotations
| Gene3D:1.20.1510.10 | MapMan:24.2.9.2.2 | Gene3D:3.30.70.1350 | InterPro:Cation_efflux | InterPro:Cation_efflux_CTD | InterPro:Cation_efflux_CTD_sf |
| InterPro:Cation_efflux_TMD_sf | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 |
| GO:GO:0008150 | GO:GO:0008324 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR027469 |
| InterPro:IPR036837 | PFAM:PF01545 | PFAM:PF16916 | PANTHER:PTHR43840 | PANTHER:PTHR43840:SF7 | SUPFAM:SSF160240 |
| SUPFAM:SSF161111 | TIGRFAMs:TIGR01297 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6B01G353300 | EnsemblPlants:TraesCS6B01G353300.1 | SEG:seg |
Description
No Description!
Coordinates
chr6B:-:619023897..619025700
Molecular Weight (calculated)
45792.0 Da
IEP (calculated)
5.020
GRAVY (calculated)
-0.089
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGDDRSAPL LANGAGRPSL RRRDSARSLR SSFLRRLPDK MRTELDPERG ADVDVARVKD LSQGEREYYR KQLAALKTFE EVEALCMPGE FGSDDDGDPD
101: ASDADDEEQK QSEFAMKISN YANIVLLAFK VYATIRTGSM AIAASTLDSL LDLMAGGILW FTHLSMKKVN IYKYPIGKLR VQPVGIIVFA AIMATLGFQV
201: LVQAIEQLVE NEPGDKLTSE QLIWLYSIML SATAVKLALW FYCRSSGNSI VRAYAKDHYF DVITNVVGLV AAVLGDRFLW WIDPAGAVLL AVYTIANWSG
301: TVLEQAVSLV GRSAPPEMLQ MLTYLAMKHD ARVQRVDTVR AYSFGALYFV EVDIELSEDM RLREAHAIGE SLQEKIEKLP EVERAFVHAD FESTHKPEHT
401: VRSRLPATEP
101: ASDADDEEQK QSEFAMKISN YANIVLLAFK VYATIRTGSM AIAASTLDSL LDLMAGGILW FTHLSMKKVN IYKYPIGKLR VQPVGIIVFA AIMATLGFQV
201: LVQAIEQLVE NEPGDKLTSE QLIWLYSIML SATAVKLALW FYCRSSGNSI VRAYAKDHYF DVITNVVGLV AAVLGDRFLW WIDPAGAVLL AVYTIANWSG
301: TVLEQAVSLV GRSAPPEMLQ MLTYLAMKHD ARVQRVDTVR AYSFGALYFV EVDIELSEDM RLREAHAIGE SLQEKIEKLP EVERAFVHAD FESTHKPEHT
401: VRSRLPATEP
001: MEVNYCPETP LLSSNDHEAI DHKPKLTGMV SSMKSNFFAD LPQKLRSKID PENPLHLDVS KAAGLKEDEK EYYERQLATL KSFEEVESFL ARSDEYTIDE
101: KEEEEDRAER AAQELAMQIS NWANIFLLAL KIYATVKSGS IAIAASTLDS LLDLMAGGIL WFTHLSMKNV NIYKYPIGKL RVQPVGIIIF AAVMATLGFQ
201: VLLVAAEQLI SNEPSEKMNH VQLIWLYSIM LSATAIKLVL WIYCKSSRNH IVRAYAKDHH FDVVTNVLGL VAAVLANAFY WWLDPTGAIL LAIYTIVNWS
301: GTVMENAVSL IGQSAPPEVL QKLTYLVMRQ GGDNIKHVDT VRAYTFGVLY FVEVDIELPE DLPLKEAHAI GESLQIKLEE LPEVERAFVH LDFECHHKPE
401: HSVLSTIPND L
101: KEEEEDRAER AAQELAMQIS NWANIFLLAL KIYATVKSGS IAIAASTLDS LLDLMAGGIL WFTHLSMKNV NIYKYPIGKL RVQPVGIIIF AAVMATLGFQ
201: VLLVAAEQLI SNEPSEKMNH VQLIWLYSIM LSATAIKLVL WIYCKSSRNH IVRAYAKDHH FDVVTNVLGL VAAVLANAFY WWLDPTGAIL LAIYTIVNWS
301: GTVMENAVSL IGQSAPPEVL QKLTYLVMRQ GGDNIKHVDT VRAYTFGVLY FVEVDIELPE DLPLKEAHAI GESLQIKLEE LPEVERAFVH LDFECHHKPE
401: HSVLSTIPND L
Arabidopsis Description
MTPC3Cation efflux family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VEZ3]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.