Factsheet for TraesCS3A01G042600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G038000.3	Wheat	cytosol	97.44	97.19
TraesCS3B01G040900.3	Wheat	cytosol, peroxisome, plasma membrane	96.16	95.67
Os01t0130000-01	Rice	cytosol	83.63	83.63
Zm00001d040002_P001	Maize	cytosol, peroxisome, plasma membrane	82.61	81.98
KXG31976	Sorghum	cytosol	82.1	81.27
CDY51006	Canola	golgi, plasma membrane	40.92	73.39
GSMUA_Achr10P...	Banana	peroxisome	69.57	71.77
GSMUA_Achr6P09720_001	Banana	peroxisome	70.59	70.41
Solyc12g017350.1.1	Tomato	cytosol, peroxisome, plasma membrane	55.5	68.67
GSMUA_Achr8P18410_001	Banana	cytosol	70.33	68.24
CDX81760	Canola	plasma membrane	62.66	64.47
CDY35081	Canola	cytosol, peroxisome, plasma membrane, plastid	65.47	64.0
CDY33342	Canola	cytosol, peroxisome, plasma membrane, plastid	65.47	64.0
Bra026067.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	65.47	64.0
KRH13763	Soybean	cytosol, peroxisome, plasma membrane	64.71	63.73
KRH13762	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	64.19	63.38
Bra026723.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	64.96	63.34
CDX88546	Canola	cytosol	64.96	63.18
CDY61375	Canola	golgi	34.53	63.08
CDX87376	Canola	cytosol	64.71	62.94
KRH43692	Soybean	cytosol, peroxisome, plasma membrane	63.68	62.88
VIT_18s0041g00090.t01	Wine grape	peroxisome	62.92	62.76
AT1G79520.2	Thale cress	peroxisome	64.96	61.35
VIT_19s0085g00650.t01	Wine grape	cytosol, peroxisome, plasma membrane	62.4	61.0
Solyc10g005500.2.1	Tomato	cytosol	63.43	60.19
KRH37933	Soybean	cytosol	62.66	59.76
AT1G16310.1	Thale cress	plasma membrane	64.71	59.11
KRH38261	Soybean	cytosol, peroxisome, plasma membrane	60.36	59.0
KRH43691	Soybean	cytosol	48.34	58.88
PGSC0003DMT400029243	Potato	cytosol, peroxisome, plasma membrane	64.45	56.12
TraesCS3A01G355500.2	Wheat	cytosol, peroxisome, plasma membrane	57.29	55.45
TraesCS1A01G287100.1	Wheat	cytosol, peroxisome, plasma membrane	56.01	53.81
PGSC0003DMT400024996	Potato	cytosol, peroxisome, plasma membrane, plastid	48.34	53.69
KRG98101	Soybean	cytosol	7.42	50.0
TraesCS4A01G077100.1	Wheat	cytosol, peroxisome, plasma membrane	46.04	44.89
TraesCS6A01G322500.1	Wheat	cytosol	45.27	43.17
Bra035123.1-P	Field mustard	cytosol, peroxisome, plasma membrane	63.94	41.46
CDX88395	Canola	endoplasmic reticulum, extracellular	12.79	36.5

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.2	Gene3D:3.30.70.1350	InterPro:Cation_efflux	InterPro:Cation_efflux_CTD	InterPro:Cation_efflux_CTD_sf
InterPro:Cation_efflux_TMD_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0008324	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR027469
InterPro:IPR036837	PFAM:PF01545	PFAM:PF16916	PANTHER:PTHR43840	PANTHER:PTHR43840:SF2	SUPFAM:SSF160240
SUPFAM:SSF161111	TIGRFAMs:TIGR01297	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3A01G042600	EnsemblPlants:TraesCS3A01G042600.1	SEG:seg

Description

No Description!

Coordinates

chr3A:-:22808970..22813073

Molecular Weight (calculated)

44109.3 Da

IEP (calculated)

6.097

GRAVY (calculated)

0.000

Length

391 amino acids

Sequence
(BLAST)

001: MATAVGREEG EPEPAAASWR LRMGSSDAMR VPEQPPFFAR LFGAACPSHG AGKQRKIAKY YEKQESLLKD FSEMESMNEL GFLDQNSAPT EEELRQLAKG
101: EKLAINLSNI INLVLFVGKV VASVETQSMA VIASTLDSLL DLLSGFILWF TAHAMKKPNK YSYPIGKRRM QPVGIVVFAS VMGCLGFQVL IESGRELVTQ
201: EHTTFDTWKE MWMVGSMSSV AVVKFFLMLY CRTFKNEIVR AYAQDHFFDV ITNSVGLVSA LLAVKYKWWM DPVGAILIAL YTITTWARTV LENVGTLIGR
301: SAPAEYLTKL TYLIWNHHEE IRHIDTVRAY TFGTHYFVEV DVVLPGDMPL SQAHDIGEAL QEKLEQLPEV ERAFVHVDFE FTHRPEHKAD V

Best Arabidopsis Sequence Match ( AT1G79520.1 )
(BLAST)

001: MAATEHRGLS GGDYNVDLLP IDQDDSPPSS WRLSLDTFRL PSSSPLSSGR HNGRTRLSRY LRTPKKERKV SEYYKQQEKL LEGFNEMETI NETGFVSGAP
101: TEEELKKLAK SERLAVHISN AANLVLFVAK VYASVESRSM AVIASTLDSL LDLLSGFILW FTANAMRTPN NFRYPIGKRR MQPVGIIVFA SVMATLGLQV
201: ILESTRLLVS KNGSHMSSTE EKWMIGIMAS ATVVKFLLML YCRSFQNEIV RAYAQDHLFD VITNSVGLAT AVLAVKFYWW IDPSGAILIA LYTISTWART
301: VLENVHSLIG RSAPPDFLAK LTFLIWNHHE KIKHIDTVRA YTFGSHYFVE VDIVLPEDMR LHEAHNIGET LQEKLEQLSE VERAFVHIDF EFTHRPEHKC
401: KV

Arabidopsis Description

Cation efflux family protein [Source:UniProtKB/TrEMBL;Acc:F4IF62]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.