Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G042600.1 | Wheat | cytosol, peroxisome, plasma membrane | 97.19 | 97.44 |
| TraesCS3B01G040900.3 | Wheat | cytosol, peroxisome, plasma membrane | 97.45 | 97.2 |
| Os01t0130000-01 | Rice | cytosol | 83.93 | 84.14 |
| Zm00001d040002_P001 | Maize | cytosol, peroxisome, plasma membrane | 82.65 | 82.23 |
| KXG31976 | Sorghum | cytosol | 81.63 | 81.01 |
| CDY51006 | Canola | golgi, plasma membrane | 41.07 | 73.85 |
| GSMUA_Achr10P... | Banana | peroxisome | 70.66 | 73.09 |
| GSMUA_Achr6P09720_001 | Banana | peroxisome | 70.41 | 70.41 |
| GSMUA_Achr8P18410_001 | Banana | cytosol | 71.43 | 69.48 |
| Solyc12g017350.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 55.87 | 69.3 |
| KRH13763 | Soybean | cytosol, peroxisome, plasma membrane | 65.82 | 64.99 |
| CDX81760 | Canola | plasma membrane | 62.76 | 64.74 |
| CDY35081 | Canola | cytosol, peroxisome, plasma membrane, plastid | 65.56 | 64.25 |
| CDY33342 | Canola | cytosol, peroxisome, plasma membrane, plastid | 65.56 | 64.25 |
| Bra026067.1-P | Field mustard | cytosol, peroxisome, plasma membrane, plastid | 65.56 | 64.25 |
| CDX88546 | Canola | cytosol | 65.82 | 64.18 |
| VIT_18s0041g00090.t01 | Wine grape | peroxisome | 64.03 | 64.03 |
| CDX87376 | Canola | cytosol | 65.56 | 63.93 |
| KRH13762 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 64.54 | 63.89 |
| KRH43692 | Soybean | cytosol, peroxisome, plasma membrane | 64.54 | 63.89 |
| Bra026723.1-P | Field mustard | cytosol, peroxisome, plasma membrane, plastid | 65.31 | 63.84 |
| CDY61375 | Canola | golgi | 34.44 | 63.08 |
| AT1G79520.2 | Thale cress | peroxisome | 65.56 | 62.08 |
| VIT_19s0085g00650.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 62.5 | 61.25 |
| Solyc10g005500.2.1 | Tomato | cytosol | 64.29 | 61.16 |
| KRH37933 | Soybean | cytosol | 63.27 | 60.49 |
| KRH43691 | Soybean | cytosol | 49.23 | 60.12 |
| KRH38261 | Soybean | cytosol, peroxisome, plasma membrane | 61.22 | 60.0 |
| AT1G16310.1 | Thale cress | plasma membrane | 64.8 | 59.35 |
| PGSC0003DMT400029243 | Potato | cytosol, peroxisome, plasma membrane | 65.05 | 56.79 |
| TraesCS3D01G349500.1 | Wheat | cytosol, peroxisome, plasma membrane | 57.91 | 56.19 |
| PGSC0003DMT400024996 | Potato | cytosol, peroxisome, plasma membrane, plastid | 48.98 | 54.55 |
| TraesCS1D01G286000.1 | Wheat | cytosol, peroxisome, plasma membrane | 56.63 | 54.55 |
| KRG98101 | Soybean | cytosol | 7.4 | 50.0 |
| TraesCS4D01G234400.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.94 | 46.0 |
| Bra035123.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 64.8 | 42.12 |
| TraesCS6D01G302400.1 | Wheat | cytosol | 46.43 | 40.44 |
| CDX88395 | Canola | endoplasmic reticulum, extracellular | 13.27 | 37.96 |
Protein Annotations
| Gene3D:1.20.1510.10 | MapMan:24.2.9.2.2 | Gene3D:3.30.70.1350 | InterPro:Cation_efflux | InterPro:Cation_efflux_CTD | InterPro:Cation_efflux_CTD_sf |
| InterPro:Cation_efflux_TMD_sf | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 |
| GO:GO:0008150 | GO:GO:0008324 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR027469 |
| InterPro:IPR036837 | PFAM:PF01545 | PFAM:PF16916 | PANTHER:PTHR43840 | PANTHER:PTHR43840:SF2 | SUPFAM:SSF160240 |
| SUPFAM:SSF161111 | TIGRFAMs:TIGR01297 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3D01G038000 | EnsemblPlants:TraesCS3D01G038000.3 | SEG:seg |
Description
No Description!
Coordinates
chr3D:+:13981196..13985367
Molecular Weight (calculated)
44366.8 Da
IEP (calculated)
6.846
GRAVY (calculated)
-0.007
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAVGREEG EPAAAASWRL RMGSSDAMRV PERLHRRPPF FSRLLGAACP SHGKQRKIAK YYEKQESLLK DFSEMESMNE LGCLDQNSAP TEEELRQLAK
101: GEKLAINLSN IINLVLFVGK VVASVETRSM AVIASTLDSL LDLLSGFILW FTAHAMKKPN KYSYPIGKRR MQPVGIVVFA SVMGCLGFQV LIESGRELVT
201: QEHTTFDTWK EMWMVGSMSS VAVVKFFLML YCRTFKNEIV RAYAQDHFFD VITNSVGLVS ALLAVKFKWW MDPVGAILIA LYTITTWART VLENVGTLIG
301: RSAPAEYLTK LTYLIWNHHE EIRHIDTVRA YTFGTHYFVE VDVVLPGDMP LSQAHDIGEA LQEKLEQLPE VERAFVHVDF EFTHRPEHKA DV
101: GEKLAINLSN IINLVLFVGK VVASVETRSM AVIASTLDSL LDLLSGFILW FTAHAMKKPN KYSYPIGKRR MQPVGIVVFA SVMGCLGFQV LIESGRELVT
201: QEHTTFDTWK EMWMVGSMSS VAVVKFFLML YCRTFKNEIV RAYAQDHFFD VITNSVGLVS ALLAVKFKWW MDPVGAILIA LYTITTWART VLENVGTLIG
301: RSAPAEYLTK LTYLIWNHHE EIRHIDTVRA YTFGTHYFVE VDVVLPGDMP LSQAHDIGEA LQEKLEQLPE VERAFVHVDF EFTHRPEHKA DV
001: MGFTLFCCEK SEKERKVSEY YKQQEKLLEG FNEMETINET GFVSGAPTEE ELKKLAKSER LAVHISNAAN LVLFVAKVYA SVESRSMAVI ASTLDSLLDL
101: LSGFILWFTA NAMRTPNNFR YPIGKRRMQP VGIIVFASVM ATLGLQVILE STRLLVSKNG SHMSSTEEKW MIGIMASATV VKFLLMLYCR SFQNEIVRAY
201: AQDHLFDVIT NSVGLATAVL AVKFYWWIDP SGAILIALYT ISTWARTVLE NVHSLIGRSA PPDFLAKLTF LIWNHHEKIK HIDTVRAYTF GSHYFVEVDI
301: VLPEDMRLHE AHNIGETLQE KLEQLSEVER AFVHIDFEFT HRPEHKCKV
101: LSGFILWFTA NAMRTPNNFR YPIGKRRMQP VGIIVFASVM ATLGLQVILE STRLLVSKNG SHMSSTEEKW MIGIMASATV VKFLLMLYCR SFQNEIVRAY
201: AQDHLFDVIT NSVGLATAVL AVKFYWWIDP SGAILIALYT ISTWARTVLE NVHSLIGRSA PPDFLAKLTF LIWNHHEKIK HIDTVRAYTF GSHYFVEVDI
301: VLPEDMRLHE AHNIGETLQE KLEQLSEVER AFVHIDFEFT HRPEHKCKV
Arabidopsis Description
Cation efflux family protein [Source:UniProtKB/TrEMBL;Acc:F4IF62]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.