CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
vacuole 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g017350.1.1	Tomato	cytosol, peroxisome, plasma membrane	60.0	75.95
VIT_19s0085g00650.t01	Wine grape	cytosol, peroxisome, plasma membrane	73.75	73.75
KRH13762	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	66.75	67.42
KRH43692	Soybean	cytosol, peroxisome, plasma membrane	66.0	66.67
KRH13763	Soybean	cytosol, peroxisome, plasma membrane	65.25	65.74
GSMUA_Achr10P...	Banana	peroxisome	62.25	65.7
GSMUA_Achr6P09720_001	Banana	peroxisome	62.75	64.03
GSMUA_Achr8P18410_001	Banana	cytosol	64.0	63.52
KRH37933	Soybean	cytosol	64.5	62.93
PGSC0003DMT400024996	Potato	cytosol, peroxisome, plasma membrane, plastid	55.25	62.78
TraesCS3D01G038000.3	Wheat	cytosol	60.0	61.22
TraesCS3B01G040900.3	Wheat	cytosol, peroxisome, plasma membrane	59.75	60.81
TraesCS3A01G042600.1	Wheat	cytosol, peroxisome, plasma membrane	59.0	60.36
Zm00001d040002_P001	Maize	cytosol, peroxisome, plasma membrane	58.75	59.64
Os01t0130000-01	Rice	cytosol	57.75	59.08
KXG31976	Sorghum	cytosol	58.0	58.73
KRH43691	Soybean	cytosol	45.0	56.07
KRH01581	Soybean	cytosol	55.25	55.81
KRH70520	Soybean	cytosol	54.75	55.3
KRG98100	Soybean	plasma membrane	40.5	55.1
KRG98101	Soybean	cytosol	6.75	46.55
KRH67095	Soybean	cytosol	45.5	45.73
KRG95425	Soybean	endoplasmic reticulum, golgi, plasma membrane	40.5	45.38
KRH17220	Soybean	cytosol, peroxisome, plasma membrane	43.75	44.64
KRH72855	Soybean	cytosol, endoplasmic reticulum, peroxisome	41.25	38.73

Protein Annotations

Gene3D:1.20.1510.10	EntrezGene:100802157	MapMan:24.2.9.2.2	Gene3D:3.30.70.1350	EMBL:ACUP02005767	InterPro:Cation_efflux
InterPro:Cation_efflux_CTD	InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf	EnsemblPlantsGene:GLYMA_09G122600	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008324	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	GO:GO:0098655	UniProt:I1L2V9	InterPro:IPR027469	InterPro:IPR036837
EnsemblPlants:KRH38261	ProteinID:KRH38261	ProteinID:KRH38261.1	PFAM:PF01545	PFAM:PF16916	PANTHER:PTHR43840
PANTHER:PTHR43840:SF16	SUPFAM:SSF160240	SUPFAM:SSF161111	TIGRFAMs:TIGR01297	TMHMM:TMhelix	UniParc:UPI00023C8E34
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:29452287..29456488

Molecular Weight (calculated)

46008.9 Da

IEP (calculated)

7.435

GRAVY (calculated)

-0.136

Length

400 amino acids

Sequence
(BLAST)

001: MGTELRTDST DYRTELLSPT IAVENVSMAR QPSWRINMEE HRLPERRMES HFGFGFFINT LKRQRKLAEY YKRQERLLKG YQEVDSYTDL GMIPGNLTED
101: EMKELERSER VAIYASNIGN MVLFVAKVYA SIESRSLAVI ASTLDSLLDL LSGFILWFTA HAMSKPNQHK YPIGKNRMQP VGIVVFASVM ATLGLQILFE
201: SGREIITKTQ PDRDPVKEKW MIGIMVTATL VKVMLMTYCR RFKNEIVRAY AQDHFFDVIT NSIGLATAVL AIKFYWWLDP VGAILIALYT ISNWAKTVME
301: NVWSLIGKTA PAEYLAKLTY LCWNHHKEIK HIDTVRAYTF GSNYFVEVDI VVSEEMSLSQ AHDIGETLQD KLEKLPEIER AFVHMDLNTT HKLEHKTKVG

Best Arabidopsis Sequence Match ( AT1G16310.1 )
(BLAST)

001: MPLNSYIFFL FLTTSPRNTF FGIRTHSDRI MATEHITRTG DEYNVELLPS DDDAPPLESS WRLNLDAFQL PSSTGGRHDG RTRFSRYFRT PRKERRVSEY
101: YKKQERLLEG FNEMETIHEN GFASGVPTEE EMKKLAKSER LAVHISNATN LVLFVAKVYA SMESRSMAVI ASTLDSLLDL LSGFILWFTA NAMRKPNQFH
201: YPIGKRRMQP VGIIVFASVM ATLGLQVLLE SGRQLVAKSG IHMNSTEEKW MIGIMVSVTI VKFLLMLYCR GFQNEIVRAY AQDHLFDVVT NSIGLATAVL
301: AVKFYWWIDP TGAILIALYT IATWARTVLE NVHSLIGRSA PPDFLAKLTF LIWNHHEQIK HIDTVRAYTF GSHYFVEVDI VLPEDMRLQE AHNIGETLQE
401: KLEQLAEVER AFVHIDFEFT HRPEHKCN

Arabidopsis Description

MTP10Metal tolerance protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q0WU02]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.