CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
vacuole 1
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43692	Soybean	cytosol, peroxisome, plasma membrane	94.44	94.44
KRH13763	Soybean	cytosol, peroxisome, plasma membrane	89.14	88.92
KRH37933	Soybean	cytosol	81.31	78.54
KRH43691	Soybean	cytosol	63.64	78.5
VIT_18s0041g00090.t01	Wine grape	peroxisome	74.49	75.26
Solyc10g005500.2.1	Tomato	cytosol	76.01	73.06
GSMUA_Achr10P...	Banana	peroxisome	65.66	68.6
PGSC0003DMT400029243	Potato	cytosol, peroxisome, plasma membrane	77.27	68.15
KRH38261	Soybean	cytosol, peroxisome, plasma membrane	67.42	66.75
GSMUA_Achr8P18410_001	Banana	cytosol	67.17	66.0
GSMUA_Achr6P09720_001	Banana	peroxisome	64.65	65.31
TraesCS3D01G038000.3	Wheat	cytosol	63.89	64.54
TraesCS3B01G040900.3	Wheat	cytosol, peroxisome, plasma membrane	63.89	64.38
Os01t0130000-01	Rice	cytosol	63.38	64.19
TraesCS3A01G042600.1	Wheat	cytosol, peroxisome, plasma membrane	63.38	64.19
Zm00001d040002_P001	Maize	cytosol, peroxisome, plasma membrane	63.64	63.96
KXG31976	Sorghum	cytosol	63.64	63.8
KRG98100	Soybean	plasma membrane	42.93	57.82
KRH01581	Soybean	cytosol	57.07	57.07
KRH70520	Soybean	cytosol	56.57	56.57
KRG98101	Soybean	cytosol	7.58	51.72
KRH67095	Soybean	cytosol	46.72	46.48
KRG95425	Soybean	endoplasmic reticulum, golgi, plasma membrane	41.67	46.22
KRH17220	Soybean	cytosol, peroxisome, plasma membrane	44.44	44.9
KRH72855	Soybean	cytosol, endoplasmic reticulum, peroxisome	42.68	39.67

Protein Annotations

Gene3D:1.20.1510.10	EntrezGene:100803531	MapMan:24.2.9.2.2	Gene3D:3.30.70.1350	EMBL:ACUP02009784	InterPro:Cation_efflux
InterPro:Cation_efflux_CTD	InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf	EnsemblPlantsGene:GLYMA_15G262300	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008324	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	GO:GO:0098655	UniProt:I1MJD0	InterPro:IPR027469	InterPro:IPR036837
EnsemblPlants:KRH13762	ProteinID:KRH13762	ProteinID:KRH13762.1	PFAM:PF01545	PFAM:PF16916	PANTHER:PTHR43840
PANTHER:PTHR43840:SF2	SUPFAM:SSF160240	SUPFAM:SSF161111	TIGRFAMs:TIGR01297	TMHMM:TMhelix	UniParc:UPI000233BE70

Description

hypothetical protein

Coordinates

chr15:+:49484391..49488666

Molecular Weight (calculated)

45630.6 Da

IEP (calculated)

8.452

GRAVY (calculated)

-0.096

Length

396 amino acids

Sequence
(BLAST)

001: MADSGRGPRR REPLLVSPEK EATKASWRLN VKEFRLPNQT NDHQNHQSFT FRGFLREPRK QRKVAEYYNK QERLLEGFNE METMTETGGF PGSLTEDEMK
101: QLAKSERMAV HVSNMCNLVL FAAKVYASIA SRSLAVIAST MDSLLDLLSG FILWFTAHAM KNPNQYHYPI GKKRMQPVGI IVFASVMATL GLQILIESAR
201: ELIFKSKPDM DPTKLHWMIG IMVCVTVVKF ILMVYCRRFK NEIVRAYAQD HFFDVITNSV GLAAAVLAVK FYWWIDPTGA IIIALYTINT WAKTVIENVW
301: SLIGRTAPPD FLAKLTFLIW NHHEQIKHID TVRAYTFGAH YFVEVDIVLP EDMLLHQAHN IGETLQEKLE QLPEVERAFV HIDFEFTHRP EHKTMV

Best Arabidopsis Sequence Match ( AT1G16310.1 )
(BLAST)

001: MPLNSYIFFL FLTTSPRNTF FGIRTHSDRI MATEHITRTG DEYNVELLPS DDDAPPLESS WRLNLDAFQL PSSTGGRHDG RTRFSRYFRT PRKERRVSEY
101: YKKQERLLEG FNEMETIHEN GFASGVPTEE EMKKLAKSER LAVHISNATN LVLFVAKVYA SMESRSMAVI ASTLDSLLDL LSGFILWFTA NAMRKPNQFH
201: YPIGKRRMQP VGIIVFASVM ATLGLQVLLE SGRQLVAKSG IHMNSTEEKW MIGIMVSVTI VKFLLMLYCR GFQNEIVRAY AQDHLFDVVT NSIGLATAVL
301: AVKFYWWIDP TGAILIALYT IATWARTVLE NVHSLIGRSA PPDFLAKLTF LIWNHHEQIK HIDTVRAYTF GSHYFVEVDI VLPEDMRLQE AHNIGETLQE
401: KLEQLAEVER AFVHIDFEFT HRPEHKCN

Arabidopsis Description

MTP10Metal tolerance protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q0WU02]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.