Factsheet for Solyc10g005500.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 2
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029243	Potato	cytosol, peroxisome, plasma membrane	96.84	88.86
Solyc12g017350.1.1	Tomato	cytosol, peroxisome, plasma membrane	61.65	80.38
CDY51006	Canola	golgi, plasma membrane	41.99	79.36
KRH43692	Soybean	cytosol, peroxisome, plasma membrane	73.79	76.77
KRH13762	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	73.06	76.01
VIT_18s0041g00090.t01	Wine grape	peroxisome	71.84	75.51
KRH13763	Soybean	cytosol, peroxisome, plasma membrane	70.39	73.05
KRH37933	Soybean	cytosol	72.09	72.44
CDY33342	Canola	cytosol, peroxisome, plasma membrane, plastid	66.99	69.0
CDY35081	Canola	cytosol, peroxisome, plasma membrane, plastid	66.99	69.0
Bra026067.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	66.99	69.0
CDX87376	Canola	cytosol	66.99	68.66
GSMUA_Achr10P...	Banana	peroxisome	63.11	68.6
CDX88546	Canola	cytosol	66.5	68.16
CDX81760	Canola	plasma membrane	62.86	68.16
Bra026723.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	66.26	68.08
AT1G79520.2	Thale cress	peroxisome	66.75	66.43
GSMUA_Achr6P09720_001	Banana	peroxisome	63.11	66.33
GSMUA_Achr8P18410_001	Banana	cytosol	63.84	65.26
KRH43691	Soybean	cytosol	50.73	65.11
CDY61375	Canola	golgi	33.74	64.95
Os01t0130000-01	Rice	cytosol	61.41	64.71
AT1G16310.1	Thale cress	plasma membrane	66.99	64.49
TraesCS3D01G038000.3	Wheat	cytosol	61.16	64.29
Zm00001d040002_P001	Maize	cytosol, peroxisome, plasma membrane	61.16	63.96
KXG31976	Sorghum	cytosol	61.16	63.8
TraesCS3B01G040900.3	Wheat	cytosol, peroxisome, plasma membrane	60.68	63.61
TraesCS3A01G042600.1	Wheat	cytosol, peroxisome, plasma membrane	60.19	63.43
Solyc05g054730.2.1	Tomato	cytosol, peroxisome, plasma membrane	55.83	57.36
Solyc03g052990.2.1	Tomato	cytosol, golgi, peroxisome	47.33	52.7
Solyc01g006150.2.1	Tomato	cytosol	48.06	48.89
Solyc12g100300.1.1	Tomato	cytosol	46.12	48.22
Bra035123.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.26	45.27
CDX88395	Canola	endoplasmic reticulum, extracellular	13.35	40.15

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.2	Gene3D:3.30.70.1350	InterPro:Cation_efflux	InterPro:Cation_efflux_CTD	InterPro:Cation_efflux_CTD_sf
InterPro:Cation_efflux_TMD_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0008324	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0098655
InterPro:IPR027469	InterPro:IPR036837	UniProt:K4CX82	PFAM:PF01545	PFAM:PF16916	PANTHER:PTHR43840
PANTHER:PTHR43840:SF2	SUPFAM:SSF160240	SUPFAM:SSF161111	EnsemblPlantsGene:Solyc10g005500.2	EnsemblPlants:Solyc10g005500.2.1	TIGRFAMs:TIGR01297
TMHMM:TMhelix	UniParc:UPI000276C767	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr10:-:414474..416809

Molecular Weight (calculated)

47057.8 Da

IEP (calculated)

6.652

GRAVY (calculated)

-0.060

Length

412 amino acids

Sequence
(BLAST)

001: MEISRSNVGG GSNDGPLFDS FRTELLSPAA QAVVDQIQSS SSASWRLNVS EFHLPEQRRS DPRCFSVRRL LPTPRKQGKI AEYYKRQERL VEGFNEMDTI
101: NESGCLPASL TEDEMKQLAR SERMAIHLSN MANVLLFVAK IYASVQSKSL AVIASTLDSL LDLLSGFILW FTSNAMRNPN QYHYPIGKKR MQPVGIIVFA
201: SVMATLGLQI LFESAKELIN QSRPEMDHEK EKWTIGIMVS VTMVKFLLMV YCRRFKNEIV RAYAQDHFFD VITNSVGLVT AVLAVRFYWW IDPAGAIIIA
301: LYTISTWART VAENVCSLIG RTAPPDFLTK LTYLIWNHHE EIKHIDTVRA YTFGVNYFVE VDIVLPEDMF LNQAHNIGET LQEKLEQLPE VERAFVHIDF
401: EFTHRPEHKI TV

Best Arabidopsis Sequence Match ( AT1G16310.1 )
(BLAST)

001: MPLNSYIFFL FLTTSPRNTF FGIRTHSDRI MATEHITRTG DEYNVELLPS DDDAPPLESS WRLNLDAFQL PSSTGGRHDG RTRFSRYFRT PRKERRVSEY
101: YKKQERLLEG FNEMETIHEN GFASGVPTEE EMKKLAKSER LAVHISNATN LVLFVAKVYA SMESRSMAVI ASTLDSLLDL LSGFILWFTA NAMRKPNQFH
201: YPIGKRRMQP VGIIVFASVM ATLGLQVLLE SGRQLVAKSG IHMNSTEEKW MIGIMVSVTI VKFLLMLYCR GFQNEIVRAY AQDHLFDVVT NSIGLATAVL
301: AVKFYWWIDP TGAILIALYT IATWARTVLE NVHSLIGRSA PPDFLAKLTF LIWNHHEQIK HIDTVRAYTF GSHYFVEVDI VLPEDMRLQE AHNIGETLQE
401: KLEQLAEVER AFVHIDFEFT HRPEHKCN

Arabidopsis Description

MTP10Metal tolerance protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q0WU02]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.