Factsheet for Bra035123.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
vacuole 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87376	Canola	cytosol	65.67	98.51
AT1G79520.2	Thale cress	peroxisome	61.36	89.37
Bra026067.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	56.88	85.75
Bra026723.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	56.05	84.29
Solyc12g017350.1.1	Tomato	cytosol, peroxisome, plasma membrane	38.31	73.1
VIT_18s0041g00090.t01	Wine grape	peroxisome	45.27	69.64
GSMUA_Achr10P...	Banana	peroxisome	42.62	67.81
Solyc10g005500.2.1	Tomato	cytosol	45.27	66.26
GSMUA_Achr8P18410_001	Banana	cytosol	43.62	65.26
TraesCS3D01G038000.3	Wheat	cytosol	42.12	64.8
TraesCS3B01G040900.3	Wheat	cytosol, peroxisome, plasma membrane	42.12	64.63
GSMUA_Achr6P09720_001	Banana	peroxisome	41.79	64.29
Zm00001d040002_P001	Maize	cytosol, peroxisome, plasma membrane	41.96	64.21
Os01t0130000-01	Rice	cytosol	41.63	64.19
TraesCS3A01G042600.1	Wheat	cytosol, peroxisome, plasma membrane	41.46	63.94
VIT_19s0085g00650.t01	Wine grape	cytosol, peroxisome, plasma membrane	42.29	63.75
KXG31976	Sorghum	cytosol	41.46	63.29
PGSC0003DMT400029243	Potato	cytosol, peroxisome, plasma membrane	45.11	60.58
PGSC0003DMT400024996	Potato	cytosol, peroxisome, plasma membrane, plastid	34.83	59.66
Bra017071.1-P	Field mustard	nucleus	37.98	58.12
Bra005039.1-P	Field mustard	cytosol, nucleus, peroxisome	34.33	56.87
KRG98101	Soybean	cytosol	5.14	53.45
Bra007377.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.67	48.05
Bra014588.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.18	46.42
Bra003316.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.51	46.34

Protein Annotations

Gene3D:1.20.1510.10	MapMan:24.2.9.2.2	Gene3D:3.30.70.1350	EnsemblPlantsGene:Bra035123	EnsemblPlants:Bra035123.1	EnsemblPlants:Bra035123.1-P
InterPro:Cation_efflux	InterPro:Cation_efflux_CTD	InterPro:Cation_efflux_CTD_sf	InterPro:Cation_efflux_TMD_sf	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150
GO:GO:0008324	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0098655	InterPro:IPR027469
InterPro:IPR036837	UniProt:M4F226	PFAM:PF01545	PFAM:PF16916	PANTHER:PTHR43840	PANTHER:PTHR43840:SF2
SUPFAM:SSF160240	SUPFAM:SSF161111	TIGRFAMs:TIGR01297	TMHMM:TMhelix	UniParc:UPI0002541D5A	SEG:seg

Description

AT1G79520 (E=1e-179) | cation efflux family protein

Coordinates

chrA07:-:22268210..22271821

Molecular Weight (calculated)

67946.7 Da

IEP (calculated)

8.432

GRAVY (calculated)

-0.085

Length

603 amino acids

Sequence
(BLAST)

001: MNMETTKEQH LGVSGQDYIV DLLPNDDDDH SSPPSSWRLS LDTFRLPSSS PLSSRRTRLS RYLRTPKKER KVSEYYKKQE KLLEGFNEME TINETGFVSG
101: APSEEELKKL AKSERLAVHI SNAANLVLFV AKAYASVESR SMAGIASTLD SLFDLLSGFI LWFTANAMSK PNHFHYPIGK RRMQPVGIIV FASVMATLGL
201: QVLLESTRLL VSKKGPNMSS AEEKWMIGIM ASATVVKFLL MLYCRSFQNE IVRAYAQDHL FDVVTNSVGL ATAVLAVKFY WWIDPSGAIL IALYTISTWA
301: RTVLENVHSL IGRSAPPDFL AKLTFLIWNH HEKIKHIDTV RAYTFGSHYF VEVDIVLPED MRLHEAHNIG ETLQEKLEQL SEVERAFVHI DFEFTHRPEH
401: KYKIFHLKCS SFLSSGRLEP IITPRFAPLQ CSGTRSQSST RLDPNFVGGS SLYSSPKVVL SSYAWILLNG YTVPLRQSFS GDLFHGTVEW PRSDASRSEQ
501: VVGSGLDFNY VWAWPVEATK PASPKFSLIK PKFKKEDAIH ITMGLGVWVK FIEIFGGFTG ISFQCILPYL SFGMNSPVGA PVWDSISPSF SREKCPLPHS
601: FFP

Best Arabidopsis Sequence Match ( AT1G79520.1 )
(BLAST)

001: MAATEHRGLS GGDYNVDLLP IDQDDSPPSS WRLSLDTFRL PSSSPLSSGR HNGRTRLSRY LRTPKKERKV SEYYKQQEKL LEGFNEMETI NETGFVSGAP
101: TEEELKKLAK SERLAVHISN AANLVLFVAK VYASVESRSM AVIASTLDSL LDLLSGFILW FTANAMRTPN NFRYPIGKRR MQPVGIIVFA SVMATLGLQV
201: ILESTRLLVS KNGSHMSSTE EKWMIGIMAS ATVVKFLLML YCRSFQNEIV RAYAQDHLFD VITNSVGLAT AVLAVKFYWW IDPSGAILIA LYTISTWART
301: VLENVHSLIG RSAPPDFLAK LTFLIWNHHE KIKHIDTVRA YTFGSHYFVE VDIVLPEDMR LHEAHNIGET LQEKLEQLSE VERAFVHIDF EFTHRPEHKC
401: KV

Arabidopsis Description

Cation efflux family protein [Source:UniProtKB/TrEMBL;Acc:F4IF62]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.