Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88546 | Canola | cytosol | 98.76 | 98.76 |
| AT1G79520.2 | Thale cress | peroxisome | 93.53 | 90.82 |
| CDY51006 | Canola | golgi, plasma membrane | 48.01 | 88.53 |
| CDY33342 | Canola | cytosol, peroxisome, plasma membrane, plastid | 86.57 | 87.0 |
| CDY35081 | Canola | cytosol, peroxisome, plasma membrane, plastid | 86.32 | 86.75 |
| CDX81760 | Canola | plasma membrane | 77.36 | 81.84 |
| CDY61375 | Canola | golgi | 41.54 | 78.04 |
| Solyc12g017350.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 57.96 | 73.73 |
| VIT_18s0041g00090.t01 | Wine grape | peroxisome | 68.66 | 70.41 |
| GSMUA_Achr10P... | Banana | peroxisome | 64.68 | 68.6 |
| CDY20436 | Canola | endoplasmic reticulum, extracellular | 20.9 | 68.29 |
| CDY20439 | Canola | endoplasmic reticulum, extracellular | 20.9 | 68.29 |
| Solyc10g005500.2.1 | Tomato | cytosol | 68.66 | 66.99 |
| Bra035123.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 98.51 | 65.67 |
| TraesCS3D01G038000.3 | Wheat | cytosol | 63.93 | 65.56 |
| GSMUA_Achr8P18410_001 | Banana | cytosol | 65.67 | 65.51 |
| TraesCS3B01G040900.3 | Wheat | cytosol, peroxisome, plasma membrane | 63.93 | 65.39 |
| GSMUA_Achr6P09720_001 | Banana | peroxisome | 63.43 | 65.05 |
| Zm00001d040002_P001 | Maize | cytosol, peroxisome, plasma membrane | 63.68 | 64.97 |
| Os01t0130000-01 | Rice | cytosol | 63.18 | 64.96 |
| TraesCS3A01G042600.1 | Wheat | cytosol, peroxisome, plasma membrane | 62.94 | 64.71 |
| VIT_19s0085g00650.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 63.68 | 64.0 |
| KXG31976 | Sorghum | cytosol | 62.69 | 63.8 |
| PGSC0003DMT400029243 | Potato | cytosol, peroxisome, plasma membrane | 68.41 | 61.25 |
| PGSC0003DMT400024996 | Potato | cytosol, peroxisome, plasma membrane, plastid | 52.74 | 60.23 |
| CDY07013 | Canola | cytosol | 57.21 | 58.08 |
| CDY53587 | Canola | cytosol, nucleus, peroxisome | 56.47 | 58.06 |
| CDX93260 | Canola | cytosol | 56.72 | 57.58 |
| CDX88395 | Canola | endoplasmic reticulum, extracellular | 19.15 | 56.2 |
| KRG98101 | Soybean | cytosol | 7.71 | 53.45 |
| CDY06055 | Canola | cytosol, peroxisome, plasma membrane | 49.25 | 48.29 |
| CDY20438 | Canola | cytosol | 27.61 | 48.05 |
| CDX71976 | Canola | cytosol, peroxisome, plasma membrane | 48.76 | 47.8 |
| CDY56242 | Canola | cytosol, peroxisome, plasma membrane | 47.51 | 46.59 |
| CDX88969 | Canola | cytosol, peroxisome, plasma membrane | 46.77 | 46.42 |
| CDY67929 | Canola | cytosol | 46.52 | 46.17 |
| CDY57242 | Canola | cytosol | 47.01 | 46.1 |
| CDY20435 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 28.11 | 41.85 |
Protein Annotations
| Gene3D:1.20.1510.10 | MapMan:24.2.9.2.2 | Gene3D:3.30.70.1350 | GO:A0A078DDM8 | EnsemblPlants:CDX87376 | ProteinID:CDX87376 |
| ProteinID:CDX87376.1 | InterPro:Cation_efflux | InterPro:Cation_efflux_CTD | InterPro:Cation_efflux_CTD_sf | InterPro:Cation_efflux_TMD_sf | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0008324 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00146345001 | InterPro:IPR027469 | InterPro:IPR036837 |
| PFAM:PF01545 | PFAM:PF16916 | PANTHER:PTHR43840 | PANTHER:PTHR43840:SF2 | SUPFAM:SSF160240 | SUPFAM:SSF161111 |
| TIGRFAMs:TIGR01297 | TMHMM:TMhelix | UniParc:UPI0004EE45DA | SEG:seg | : | : |
Description
BnaA07g34970D
Coordinates
chrLK031850:+:334435..337892
Molecular Weight (calculated)
45744.1 Da
IEP (calculated)
7.158
GRAVY (calculated)
-0.122
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: METTKEQHLG VSGQDYIVDL LPNDDDDHSS PPSSWRLSLD TFRLPSSSPL SSRRTRLSRY LRTPKKERKV SEYYKKQEKL LEGFNEMETI NETGFVSGAP
101: SEEELKKLAK SERLAVHISN AANLVLFVAK AYASVESRSM AVIASTLDSL LDLLSGFILW FTANAMSKPN HFHYPIGKRR MQPVGIIVFA SVMATLGLQV
201: LLESTRLLVS KNGPHMSSTE EKWMIGIMAS ATVVKFLLML YCRSFQNEIV RAYAQDHLFD VVTNSVGLAT AVLAVKFYWW IDPSGAILIA LYTISTWART
301: VLENVHSLIG RSAPPDFLAK LTFLIWNHHE KIKHIDTVRA YTFGSHYFVE VDIVLPEDMR LHEAHNIGET LQEKLEQLSE VERAFVHIDF EFTHRPEHKY
401: KV
101: SEEELKKLAK SERLAVHISN AANLVLFVAK AYASVESRSM AVIASTLDSL LDLLSGFILW FTANAMSKPN HFHYPIGKRR MQPVGIIVFA SVMATLGLQV
201: LLESTRLLVS KNGPHMSSTE EKWMIGIMAS ATVVKFLLML YCRSFQNEIV RAYAQDHLFD VVTNSVGLAT AVLAVKFYWW IDPSGAILIA LYTISTWART
301: VLENVHSLIG RSAPPDFLAK LTFLIWNHHE KIKHIDTVRA YTFGSHYFVE VDIVLPEDMR LHEAHNIGET LQEKLEQLSE VERAFVHIDF EFTHRPEHKY
401: KV
001: MAATEHRGLS GGDYNVDLLP IDQDDSPPSS WRLSLDTFRL PSSSPLSSGR HNGRTRLSRY LRTPKKERKV SEYYKQQEKL LEGFNEMETI NETGFVSGAP
101: TEEELKKLAK SERLAVHISN AANLVLFVAK VYASVESRSM AVIASTLDSL LDLLSGFILW FTANAMRTPN NFRYPIGKRR MQPVGIIVFA SVMATLGLQV
201: ILESTRLLVS KNGSHMSSTE EKWMIGIMAS ATVVKFLLML YCRSFQNEIV RAYAQDHLFD VITNSVGLAT AVLAVKFYWW IDPSGAILIA LYTISTWART
301: VLENVHSLIG RSAPPDFLAK LTFLIWNHHE KIKHIDTVRA YTFGSHYFVE VDIVLPEDMR LHEAHNIGET LQEKLEQLSE VERAFVHIDF EFTHRPEHKC
401: KV
101: TEEELKKLAK SERLAVHISN AANLVLFVAK VYASVESRSM AVIASTLDSL LDLLSGFILW FTANAMRTPN NFRYPIGKRR MQPVGIIVFA SVMATLGLQV
201: ILESTRLLVS KNGSHMSSTE EKWMIGIMAS ATVVKFLLML YCRSFQNEIV RAYAQDHLFD VITNSVGLAT AVLAVKFYWW IDPSGAILIA LYTISTWART
301: VLENVHSLIG RSAPPDFLAK LTFLIWNHHE KIKHIDTVRA YTFGSHYFVE VDIVLPEDMR LHEAHNIGET LQEKLEQLSE VERAFVHIDF EFTHRPEHKC
401: KV
Arabidopsis Description
Cation efflux family protein [Source:UniProtKB/TrEMBL;Acc:F4IF62]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.