Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20439 | Canola | endoplasmic reticulum, extracellular | 39.45 | 69.92 |
| CDY20436 | Canola | endoplasmic reticulum, extracellular | 39.45 | 69.92 |
| CDX81760 | Canola | plasma membrane | 96.33 | 55.26 |
| Bra026723.1-P | Field mustard | cytosol, peroxisome, plasma membrane, plastid | 96.79 | 52.62 |
| Solyc12g017350.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 76.15 | 52.53 |
| KRG98101 | Soybean | cytosol | 13.76 | 51.72 |
| CDY35081 | Canola | cytosol, peroxisome, plasma membrane, plastid | 94.04 | 51.25 |
| CDY33342 | Canola | cytosol, peroxisome, plasma membrane, plastid | 94.04 | 51.25 |
| CDX88546 | Canola | cytosol | 88.99 | 48.26 |
| CDX87376 | Canola | cytosol | 88.53 | 48.01 |
| AT1G16310.1 | Thale cress | plasma membrane | 93.58 | 47.66 |
| VIT_18s0041g00090.t01 | Wine grape | peroxisome | 81.19 | 45.15 |
| GSMUA_Achr10P... | Banana | peroxisome | 77.98 | 44.85 |
| CDY61375 | Canola | golgi | 42.66 | 43.46 |
| GSMUA_Achr6P09720_001 | Banana | peroxisome | 75.69 | 42.09 |
| Solyc10g005500.2.1 | Tomato | cytosol | 79.36 | 41.99 |
| VIT_19s0085g00650.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 76.15 | 41.5 |
| Os01t0130000-01 | Rice | cytosol | 74.31 | 41.43 |
| TraesCS3D01G038000.3 | Wheat | cytosol | 73.85 | 41.07 |
| KXG31976 | Sorghum | cytosol | 74.31 | 41.01 |
| TraesCS3B01G040900.3 | Wheat | cytosol, peroxisome, plasma membrane | 73.85 | 40.97 |
| TraesCS3A01G042600.1 | Wheat | cytosol, peroxisome, plasma membrane | 73.39 | 40.92 |
| Zm00001d040002_P001 | Maize | cytosol, peroxisome, plasma membrane | 73.85 | 40.86 |
| GSMUA_Achr8P18410_001 | Banana | cytosol | 74.31 | 40.2 |
| PGSC0003DMT400029243 | Potato | cytosol, peroxisome, plasma membrane | 78.9 | 38.31 |
| CDY07013 | Canola | cytosol | 67.43 | 37.12 |
| CDY53587 | Canola | cytosol, nucleus, peroxisome | 66.51 | 37.08 |
| CDX93260 | Canola | cytosol | 66.97 | 36.87 |
| PGSC0003DMT400024996 | Potato | cytosol, peroxisome, plasma membrane, plastid | 52.29 | 32.39 |
| CDY06055 | Canola | cytosol, peroxisome, plasma membrane | 60.55 | 32.2 |
| CDX71976 | Canola | cytosol, peroxisome, plasma membrane | 60.55 | 32.2 |
| CDY67929 | Canola | cytosol | 58.72 | 31.6 |
| CDX88969 | Canola | cytosol, peroxisome, plasma membrane | 58.72 | 31.6 |
| CDY57242 | Canola | cytosol | 58.72 | 31.22 |
| CDY56242 | Canola | cytosol, peroxisome, plasma membrane | 58.26 | 30.98 |
| CDY20438 | Canola | cytosol | 11.47 | 10.82 |
| CDY20435 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 11.47 | 9.26 |
| CDX88395 | Canola | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1510.10 | MapMan:24.2.9.2.2 | Gene3D:3.30.70.1350 | GO:A0A078ILW6 | UniProt:A0A078ILW6 | EnsemblPlants:CDY51006 |
| ProteinID:CDY51006 | ProteinID:CDY51006.1 | InterPro:Cation_efflux | InterPro:Cation_efflux_CTD | InterPro:Cation_efflux_CTD_sf | InterPro:Cation_efflux_TMD_sf |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 |
| GO:GO:0008150 | GO:GO:0008324 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | GO:GO:0098655 |
| EnsemblPlantsGene:GSBRNA2T00097987001 | InterPro:IPR027469 | InterPro:IPR036837 | PFAM:PF01545 | PFAM:PF16916 | PANTHER:PTHR43840 |
| PANTHER:PTHR43840:SF2 | SUPFAM:SSF160240 | SUPFAM:SSF161111 | TMHMM:TMhelix | UniParc:UPI0004EDE435 | : |
Description
BnaA09g56350DBnaA09g56350D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078ILW6]
Coordinates
chrLK032955:-:96355..97645
Molecular Weight (calculated)
25119.5 Da
IEP (calculated)
6.433
GRAVY (calculated)
0.208
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: GIIVFASVMA TLGLQVLLES GRQLASKVHQ NVFFRTEEKW MIGIMVSVTI IKFLLMLYCR GFQNEIVRAY AQDHFFDVVT NSIGLATAVL AVKFYWWIDP
101: SGAILIALYT IGTWARTVLE NVHSLIGRSA PPEFLTKLTF LIWNHHEQIK HIDTVRAYTF GSHYFVEVDI VLPEDMRLQE AHNIGETLQE KLEQLAEVER
201: AFVHIDFEFT HRPEHKCN
101: SGAILIALYT IGTWARTVLE NVHSLIGRSA PPEFLTKLTF LIWNHHEQIK HIDTVRAYTF GSHYFVEVDI VLPEDMRLQE AHNIGETLQE KLEQLAEVER
201: AFVHIDFEFT HRPEHKCN
001: MPLNSYIFFL FLTTSPRNTF FGIRTHSDRI MATEHITRTG DEYNVELLPS DDDAPPLESS WRLNLDAFQL PSSTGGRHDG RTRFSRYFRT PRKERRVSEY
101: YKKQERLLEG FNEMETIHEN GFASGVPTEE EMKKLAKSER LAVHISNATN LVLFVAKVYA SMESRSMAVI ASTLDSLLDL LSGFILWFTA NAMRKPNQFH
201: YPIGKRRMQP VGIIVFASVM ATLGLQVLLE SGRQLVAKSG IHMNSTEEKW MIGIMVSVTI VKFLLMLYCR GFQNEIVRAY AQDHLFDVVT NSIGLATAVL
301: AVKFYWWIDP TGAILIALYT IATWARTVLE NVHSLIGRSA PPDFLAKLTF LIWNHHEQIK HIDTVRAYTF GSHYFVEVDI VLPEDMRLQE AHNIGETLQE
401: KLEQLAEVER AFVHIDFEFT HRPEHKCN
101: YKKQERLLEG FNEMETIHEN GFASGVPTEE EMKKLAKSER LAVHISNATN LVLFVAKVYA SMESRSMAVI ASTLDSLLDL LSGFILWFTA NAMRKPNQFH
201: YPIGKRRMQP VGIIVFASVM ATLGLQVLLE SGRQLVAKSG IHMNSTEEKW MIGIMVSVTI VKFLLMLYCR GFQNEIVRAY AQDHLFDVVT NSIGLATAVL
301: AVKFYWWIDP TGAILIALYT IATWARTVLE NVHSLIGRSA PPDFLAKLTF LIWNHHEQIK HIDTVRAYTF GSHYFVEVDI VLPEDMRLQE AHNIGETLQE
401: KLEQLAEVER AFVHIDFEFT HRPEHKCN
Arabidopsis Description
MTP10Metal tolerance protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q0WU02]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.