Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- peroxisome 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87376 | Canola | cytosol | 90.82 | 93.53 |
| CDX88546 | Canola | cytosol | 90.58 | 93.28 |
| AT1G16310.1 | Thale cress | plasma membrane | 82.85 | 80.14 |
| Solyc12g017350.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 56.52 | 74.05 |
| VIT_18s0041g00090.t01 | Wine grape | peroxisome | 67.87 | 71.68 |
| GSMUA_Achr10P... | Banana | peroxisome | 62.8 | 68.6 |
| Solyc10g005500.2.1 | Tomato | cytosol | 66.43 | 66.75 |
| TraesCS3D01G038000.3 | Wheat | cytosol | 62.08 | 65.56 |
| Os01t0130000-01 | Rice | cytosol | 61.84 | 65.47 |
| TraesCS3B01G040900.3 | Wheat | cytosol, peroxisome, plasma membrane | 62.08 | 65.39 |
| Zm00001d040002_P001 | Maize | cytosol, peroxisome, plasma membrane | 62.08 | 65.23 |
| TraesCS3A01G042600.1 | Wheat | cytosol, peroxisome, plasma membrane | 61.35 | 64.96 |
| GSMUA_Achr6P09720_001 | Banana | peroxisome | 61.35 | 64.8 |
| GSMUA_Achr8P18410_001 | Banana | cytosol | 63.04 | 64.76 |
| KXG31976 | Sorghum | cytosol | 60.87 | 63.8 |
| VIT_19s0085g00650.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 61.59 | 63.75 |
| Bra035123.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 89.37 | 61.36 |
| PGSC0003DMT400024996 | Potato | cytosol, peroxisome, plasma membrane, plastid | 51.93 | 61.08 |
| PGSC0003DMT400029243 | Potato | cytosol, peroxisome, plasma membrane | 66.18 | 61.02 |
| AT2G39450.1 | Thale cress | cytosol, peroxisome, plasma membrane | 55.8 | 58.63 |
| KRG98101 | Soybean | cytosol | 7.49 | 53.45 |
| AT3G58060.1 | Thale cress | cytosol, peroxisome, plasma membrane | 47.34 | 47.69 |
Protein Annotations
| Gene3D:1.20.1510.10 | MapMan:24.2.9.2.2 | Gene3D:3.30.70.1350 | EntrezGene:844290 | ProteinID:AEE36259.1 | ArrayExpress:AT1G79520 |
| EnsemblPlantsGene:AT1G79520 | RefSeq:AT1G79520 | TAIR:AT1G79520 | RefSeq:AT1G79520-TAIR-G | EnsemblPlants:AT1G79520.2 | TAIR:AT1G79520.2 |
| Unigene:At.43219 | InterPro:Cation_efflux | InterPro:Cation_efflux_CTD | InterPro:Cation_efflux_CTD_sf | InterPro:Cation_efflux_TMD_sf | UniProt:F4IF62 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0006812 | GO:GO:0008150 | GO:GO:0008324 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 |
| GO:GO:0098655 | InterPro:IPR027469 | InterPro:IPR036837 | RefSeq:NP_001185437.1 | PFAM:PF01545 | PFAM:PF16916 |
| PO:PO:0000013 | PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0020030 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR43840 |
| PANTHER:PTHR43840:SF2 | SUPFAM:SSF160240 | SUPFAM:SSF161111 | TIGRFAMs:TIGR01297 | TMHMM:TMhelix | UniParc:UPI0001E92C5F |
| SEG:seg | : | : | : | : | : |
Description
Cation efflux family protein [Source:UniProtKB/TrEMBL;Acc:F4IF62]
Coordinates
chr1:-:29912251..29914615
Molecular Weight (calculated)
46951.7 Da
IEP (calculated)
7.524
GRAVY (calculated)
-0.027
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATEHRGLS GGDYNVDLLP IDQDDSPPSS WRLSLDTFRL PSSSPLSSGR HNGRTRLSRY LRTPSKFLFL VLVLNLQKER KVSEYYKQQE KLLEGFNEME
101: TINETGFVSG APTEEELKKL AKSERLAVHI SNAANLVLFV AKVYASVESR SMAVIASTLD SLLDLLSGFI LWFTANAMRT PNNFRYPIGK RRMQPVGIIV
201: FASVMATLGL QVILESTRLL VSKNGSHMSS TEEKWMIGIM ASATVVKFLL MLYCRSFQNE IVRAYAQDHL FDVITNSVGL ATAVLAVKFY WWIDPSGAIL
301: IALYTISTWA RTVLENVHSL IGRSAPPDFL AKLTFLIWNH HEKIKHIDTV RAYTFGSHYF VEVDIVLPED MRLHEAHNIG ETLQEKLEQL SEVERAFVHI
401: DFEFTHRPEH KCKV
101: TINETGFVSG APTEEELKKL AKSERLAVHI SNAANLVLFV AKVYASVESR SMAVIASTLD SLLDLLSGFI LWFTANAMRT PNNFRYPIGK RRMQPVGIIV
201: FASVMATLGL QVILESTRLL VSKNGSHMSS TEEKWMIGIM ASATVVKFLL MLYCRSFQNE IVRAYAQDHL FDVITNSVGL ATAVLAVKFY WWIDPSGAIL
301: IALYTISTWA RTVLENVHSL IGRSAPPDFL AKLTFLIWNH HEKIKHIDTV RAYTFGSHYF VEVDIVLPED MRLHEAHNIG ETLQEKLEQL SEVERAFVHI
401: DFEFTHRPEH KCKV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.