Factsheet for Solyc09g065240.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, vacuole
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid, vacuole
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g071920.2.1
Solyc03g005980.2.1
Solyc03g120880.2.1
Solyc05g015640.2.1
Solyc05g054730.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63200.1	Solyc05g015640.2.1	AT1G27300.1	21798944
AT3G63200.1	Solyc05g054730.2.1	AT2G39450.1	21798944
AT3G63200.1	Solyc03g120880.2.1	AT3G16310.1	21798944
AT3G63200.1	Solyc02g071920.2.1	AT4G19030.1	21798944
AT3G63200.1	Solyc03g005980.2.1	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400033524	Potato	cytosol	97.13	98.15
VIT_07s0151g01130.t01	Wine grape	cytosol	74.93	74.55
CDY56455	Canola	cytosol	67.36	70.49
AT3G63200.1	Thale cress	cytosol	70.5	70.31
KRH32021	Soybean	cytosol	68.67	69.21
Bra040428.1-P	Field mustard	cytosol	69.71	68.99
CDX89181	Canola	cytosol	69.71	68.99
KRH71425	Soybean	cytosol	68.15	68.87
CDX93922	Canola	cytosol	69.45	68.73
Bra007735.1-P	Field mustard	cytosol	68.93	68.57
CDX76689	Canola	cytosol	68.93	68.57
KRG95536	Soybean	cytosol	65.01	65.18
KRH67210	Soybean	cytosol	65.27	62.5
Solyc05g056030.2.1	Tomato	cytosol	45.17	37.12
Solyc10g080690.1.1	Tomato	cytosol	41.25	36.57
Solyc10g078530.1.1	Tomato	cytosol	39.69	34.94
Solyc04g079220.1.1	Tomato	cytosol	4.96	25.33
Solyc02g090490.2.1	Tomato	extracellular	25.85	24.03
Solyc04g079240.2.1	Tomato	nucleus	25.07	23.3
Solyc04g079260.2.1	Tomato	cytosol	24.28	22.91
Solyc02g065090.2.1	Tomato	nucleus	25.07	22.86
Solyc04g079250.2.1	Tomato	cytosol	23.5	22.22
Solyc02g065100.1.1	Tomato	endoplasmic reticulum, extracellular	23.76	22.14
Solyc02g090630.2.1	Tomato	cytosol	22.72	22.03
Solyc03g044710.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	23.24	21.71
Solyc02g090660.1.1	Tomato	cytosol, peroxisome, plastid	15.14	21.01
Solyc08g006860.2.1	Tomato	extracellular	19.84	19.84
Solyc08g006850.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	19.06	19.36
Solyc04g079210.2.1	Tomato	cytosol	6.01	14.2

Protein Annotations

EnsemblPlants:Solyc09g065240.2.1	EnsemblPlantsGene:Solyc09g065240.2	Gene3D:3.40.1090.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	InterPro:Acyl_Trfase/lysoPLipase
InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PANTHER:PTHR32241:SF5	PFAM:PF01734	PFscan:PS51635
SUPFAM:SSF52151	UniParc:UPI000276C51A	UniProt:K4CUF1	MapMan:5.7.2.2.4	:	:

Description

Probable inactive patatin-like protein 9 [Source:Projected from Arabidopsis thaliana (AT3G63200) UniProtKB/Swiss-Prot;Acc:Q93ZQ3]

Coordinates

chr9:-:63298282..63300247

Molecular Weight (calculated)

41360.8 Da

IEP (calculated)

9.050

GRAVY (calculated)

-0.097

Length

383 amino acids

Sequence
(BLAST)

001: MDFSKISLEI FSKLEQKWLY HYEGKKTRVL SIDGGGTTGI VSGAALIHLE NQICAKTGDP HVRISDFFDI VVGTGIGAIY AAMLVVDGGD GRPLFTAKDA
101: VKFVKENQSR LFKAKKVGVL RRKKRFSGNS MEKVLKEVFR REDGKALTLR DTCKPLLVPC FDLNSAAPFV FSRADAIESF SYDFDLWKVC RATSANPSMF
201: KPFNLKSVDG KTSCLAVDGG LVMNNPAAAA VTHVLHNKRD FPSVTGVDDL LVLSLGNGPL NSTANLKMRN DGYCSPLSVV GIVFDGVSET VDQMLGNAFC
301: WNPNDYVRVQ ATGYASGGVG PGVEEALEER GVESLPFGGK RLLTETNGQR IGGLVQRLVA TGRSSVPPSP CKDVAVSPLR NGR

Best Arabidopsis Sequence Match ( AT3G63200.1 )
(BLAST)

001: MEMDLSKVTL DIFTKLEQKW LSHCDSSRKT RILSIDGGGT TGIVAAASIL HLEHQIRLQT GDPHAHISDF FDIVAGTGIG GILAALLVAD DGSGRPMFTA
101: RDAVKFVAEK NSELFEIRYT GVFRRNKRYS GKSMERVLET AFRREDGKVL TMKDTCKPLL VPCYDLKTSA PFVFSRAGAS ESPSFDFELW KVCRATSATP
201: SLFKPFSVVS VDGKTSCSAV DGGLVMNNPT AAAVTHVLHN KRDFPSVNGV DDLLVLSLGN GPSTMSSSPG RKLRRNGDYS TSSVVDIVVD GVSDTVDQML
301: GNAFCWNRTD YVRIQANGLT SGGAEELLKE RGVETAPFGV KRILTESNGE RIEGFVQRLV ASGKSSLPPS PCKESAVNPL ADGR

Arabidopsis Description

PLP9Probable inactive patatin-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZQ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.