Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- vacuole 2
- plastid 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g079250.2.1 | Tomato | cytosol | 89.9 | 90.12 |
| VIT_18s0001g11010.t01 | Wine grape | cytosol | 70.94 | 70.94 |
| KRH05706 | Soybean | cytosol, extracellular, nucleus | 65.02 | 70.21 |
| KRH15336 | Soybean | cytosol | 69.95 | 69.61 |
| VIT_18s0001g10940.t01 | Wine grape | cytosol, peroxisome, plastid | 69.46 | 69.46 |
| VIT_18s0001g10980.t01 | Wine grape | cytosol, peroxisome, plastid | 66.5 | 69.05 |
| VIT_18s0001g10950.t01 | Wine grape | cytosol, peroxisome, plastid | 68.97 | 68.97 |
| VIT_18s0001g10880.t01 | Wine grape | cytosol | 68.97 | 68.97 |
| VIT_18s0001g10970.t01 | Wine grape | cytosol, peroxisome, plastid | 68.72 | 68.72 |
| KRH05707 | Soybean | cytosol | 68.72 | 68.22 |
| KRH51959 | Soybean | nucleus | 68.47 | 67.15 |
| Solyc04g079240.2.1 | Tomato | nucleus | 67.24 | 66.26 |
| KRH15337 | Soybean | cytosol | 25.62 | 63.03 |
| VIT_18s0001g10920.t01 | Wine grape | extracellular | 66.75 | 62.16 |
| Solyc02g090630.2.1 | Tomato | cytosol | 60.1 | 61.77 |
| Solyc04g079220.1.1 | Tomato | cytosol | 10.59 | 57.33 |
| GSMUA_Achr3P06850_001 | Banana | cytosol | 56.9 | 56.62 |
| Solyc04g079210.2.1 | Tomato | cytosol | 21.18 | 53.09 |
| Solyc02g090490.2.1 | Tomato | extracellular | 53.2 | 52.43 |
| Solyc03g044710.2.1 | Tomato | endoplasmic reticulum, golgi, vacuole | 52.71 | 52.2 |
| Solyc02g065090.2.1 | Tomato | nucleus | 52.96 | 51.19 |
| Solyc02g065100.1.1 | Tomato | endoplasmic reticulum, extracellular | 50.25 | 49.63 |
| Solyc02g090660.1.1 | Tomato | cytosol, peroxisome, plastid | 32.27 | 47.46 |
| Solyc08g006850.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 40.39 | 43.5 |
| Solyc08g006860.2.1 | Tomato | extracellular | 39.9 | 42.3 |
| Solyc10g080690.1.1 | Tomato | cytosol | 28.57 | 26.85 |
| Solyc10g078530.1.1 | Tomato | cytosol | 26.85 | 25.06 |
| Solyc05g056030.2.1 | Tomato | cytosol | 28.08 | 24.46 |
| Solyc09g065240.2.1 | Tomato | cytosol | 22.91 | 24.28 |
Protein Annotations
| Gene3D:3.40.1090.10 | MapMan:5.7.2.2.3 | InterPro:Acyl_Trfase/lysoPLipase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004620 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016020 | GO:GO:0016042 | GO:GO:0016787 | GO:GO:0047372 |
| InterPro:IPR002641 | UniProt:K4BV10 | PFAM:PF01734 | InterPro:PNPLA_dom | PFscan:PS51635 | PANTHER:PTHR32176 |
| PANTHER:PTHR32176:SF6 | SUPFAM:SSF52151 | EnsemblPlantsGene:Solyc04g079260.2 | EnsemblPlants:Solyc04g079260.2.1 | UniParc:UPI0002766FE1 | SEG:seg |
Description
Patatin [Source:UniProtKB/TrEMBL;Acc:K4BV10]
Coordinates
chr4:-:63778153..63780460
Molecular Weight (calculated)
44965.4 Da
IEP (calculated)
8.257
GRAVY (calculated)
-0.205
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MERKTSQIQP PTYGDFITIL SIDGGGIRGI IPATILTFLE SQLQELDGKN ARIADYFDVI AGTSTGGLVA AMLTAPDENH RPLYAAKDIT PFYLEHCPKI
101: FPQKKCGLFA PIGKMVQALI GPKYDGKYLH EVVKEKLKDI CISNTITNVV IPTFDIKKLQ PTIFSTYETK RSTCCDAKLS DICISTSAAP TYLPAHYFKV
201: EDGKGNVKEH HLIDGGVAAN NPGLIAISEV SKEIFKNNPD FFPIKPMDYG RFLVISLGTG AAKCEQKYNS LMGAKWGIVD WLIHKGSTPL VEVFTQSSAD
301: MVDYHNSIVF QALRSENSYL RIQEDELIGT EASVDVATKK NLERLVEIGE QLLKKPLSRV NLETGLSEPT PKGGTNEEAL KRFARLLVNE RRLRELRSPL
401: IKKASK
101: FPQKKCGLFA PIGKMVQALI GPKYDGKYLH EVVKEKLKDI CISNTITNVV IPTFDIKKLQ PTIFSTYETK RSTCCDAKLS DICISTSAAP TYLPAHYFKV
201: EDGKGNVKEH HLIDGGVAAN NPGLIAISEV SKEIFKNNPD FFPIKPMDYG RFLVISLGTG AAKCEQKYNS LMGAKWGIVD WLIHKGSTPL VEVFTQSSAD
301: MVDYHNSIVF QALRSENSYL RIQEDELIGT EASVDVATKK NLERLVEIGE QLLKKPLSRV NLETGLSEPT PKGGTNEEAL KRFARLLVNE RRLRELRSPL
401: IKKASK
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
Arabidopsis Description
PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.