CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

cytosol 2
vacuole 2
plasma membrane 1
mitochondrion 1
extracellular 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15337	Soybean	cytosol	38.56	87.88
KRH15336	Soybean	cytosol	93.62	86.27
KRH05707	Soybean	cytosol	93.09	85.57
KRH51959	Soybean	nucleus	82.71	75.12
KRH61261	Soybean	cytosol, peroxisome, plastid	41.49	69.33
Solyc04g079250.2.1	Tomato	cytosol	72.07	66.91
Solyc04g079260.2.1	Tomato	cytosol	70.21	65.02
VIT_18s0001g11010.t01	Wine grape	cytosol	69.95	64.78
VIT_18s0001g10950.t01	Wine grape	cytosol, peroxisome, plastid	69.15	64.04
VIT_18s0001g10880.t01	Wine grape	cytosol	69.15	64.04
VIT_18s0001g10970.t01	Wine grape	cytosol, peroxisome, plastid	68.88	63.79
VIT_18s0001g10940.t01	Wine grape	cytosol, peroxisome, plastid	68.88	63.79
Solyc04g079240.2.1	Tomato	nucleus	69.15	63.11
VIT_18s0001g10980.t01	Wine grape	cytosol, peroxisome, plastid	64.89	62.4
VIT_18s0001g10920.t01	Wine grape	extracellular	67.02	57.8
KRH15338	Soybean	cytosol	61.17	56.37
KRH15334	Soybean	cytosol	60.9	56.13
KRH05709	Soybean	cytosol	60.37	55.64
GSMUA_Achr3P06850_001	Banana	cytosol	60.11	55.39
KRH28482	Soybean	cytosol	59.04	55.09
KRH05708	Soybean	cytosol	54.26	54.11
KRH48830	Soybean	extracellular, vacuole	47.07	42.34
KRH48827	Soybean	cytosol, plastid	23.94	37.82
KRH48829	Soybean	endoplasmic reticulum, extracellular	40.69	37.59
KRH34879	Soybean	cytosol	27.39	22.25
KRH36757	Soybean	cytosol	24.73	21.43
KRH32021	Soybean	cytosol	21.54	21.32
KRH11757	Soybean	cytosol	24.47	21.3
KRG95536	Soybean	cytosol	21.54	21.2
KRH71425	Soybean	cytosol	21.28	21.11
KRH67210	Soybean	cytosol	21.28	20.0
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	26.86	18.57

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	EMBL:ACUP02010773	InterPro:Acyl_Trfase/lysoPLipase	EnsemblPlantsGene:GLYMA_17G243900	GO:GO:0003674
GO:GO:0003824	GO:GO:0004620	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016020	GO:GO:0016042
GO:GO:0016787	GO:GO:0047372	InterPro:IPR002641	UniProt:K7MNQ8	EnsemblPlants:KRH05706	ProteinID:KRH05706
ProteinID:KRH05706.1	PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF24
SUPFAM:SSF52151	UniParc:UPI0002955819	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:39944112..39946730

Molecular Weight (calculated)

41845.9 Da

IEP (calculated)

6.187

GRAVY (calculated)

-0.356

Length

376 amino acids

Sequence
(BLAST)

001: MERAKSSIEQ IQPPTYGNLV TILSIDGGGI RGIIPATIID FLESQLQELD GPEARLADYF DVISGTSTGG LVTAMITAPD NNNRPLFAAK DIKPFYMDHC
101: PKIFPQHSGL GPKYDGKYLH EVVREKLGDI HLHETLTNVI KMWPCMDAKL SDICISTSAA PTYLPAHNFN NHDSKGNVHE FNLIDGGVCA NNPTLVAMNE
201: VTKQIIKQNS DFFPIKPMEY GRFLIISIGT GTSKTEEKFN AQMAAKWGLL DWLTQSGSNP LIDVFSQSSA DMVDFHLSAV TQALNSQDNY LRIQDDTLTG
301: TDSSVDIATK ENLEKLYQIG ENLLKKPVSR VNLENGLFQP LKNGETNEHA LKRFAKILSQ ERRLREMRSP NTKKTF

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.