CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
vacuole 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, vacuole
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	95.25	81.07
VIT_13s0019g04200.t01	Wine grape	cytosol	77.97	78.82
PGSC0003DMT400060317	Potato	cytosol	73.0	72.53
Solyc05g056030.2.1	Tomato	cytosol	73.0	72.53
CDY07662	Canola	cytosol	69.98	68.07
CDX74862	Canola	cytosol	65.66	67.71
CDY24974	Canola	cytosol	69.55	67.65
Bra000125.1-P	Field mustard	cytosol	69.98	67.08
AT2G39220.1	Thale cress	cytosol	70.41	65.33
AT3G54950.1	Thale cress	mitochondrion	68.68	65.16
GSMUA_Achr8P18860_001	Banana	cytosol	46.65	65.06
CDY44633	Canola	cytosol	68.25	65.02
CDX67618	Canola	mitochondrion	65.23	64.81
CDX73423	Canola	mitochondrion	68.25	64.36
Bra003202.1-P	Field mustard	mitochondrion	66.09	64.29
Bra005058.1-P	Field mustard	cytosol	67.6	64.27
CDY07512	Canola	mitochondrion	65.66	64.0
CDY56960	Canola	mitochondrion	67.17	63.99
Bra007119.1-P	Field mustard	mitochondrion	68.03	63.51
GSMUA_Achr5P18500_001	Banana	cytosol	53.13	63.4
GSMUA_Achr5P03830_001	Banana	cytosol	59.4	63.36
GSMUA_Achr2P12330_001	Banana	cytosol	54.64	63.25
GSMUA_Achr11P...	Banana	mitochondrion	38.88	62.5
CDX68587	Canola	nucleus	63.28	58.72
CDY43526	Canola	nucleus	61.56	58.4
EER95163	Sorghum	cytosol	57.24	57.61
AT4G29800.2	Thale cress	cytosol	65.01	57.22
Zm00001d028482_P001	Maize	cytosol	56.37	56.74
Os03t0254400-01	Rice	cytosol	55.72	55.01
TraesCS4B01G221000.1	Wheat	cytosol	54.64	55.0
TraesCS4D01G221300.1	Wheat	cytosol	54.43	54.9
TraesCS4A01G083200.1	Wheat	cytosol	54.64	54.76
KRH11757	Soybean	cytosol	45.14	48.38
KRH36757	Soybean	cytosol	45.14	48.16
KRH71425	Soybean	cytosol	37.58	45.91
HORVU0Hr1G008670.3	Barley	cytosol	39.52	45.3
KRH32021	Soybean	cytosol	37.15	45.26
KRG95536	Soybean	cytosol	36.07	43.72
KRH67210	Soybean	cytosol	35.21	40.75
KRH61261	Soybean	cytosol, peroxisome, plastid	15.98	32.89
KRH51959	Soybean	nucleus	26.13	29.23
KRH05709	Soybean	cytosol	24.62	27.94
KRH05706	Soybean	cytosol, extracellular, nucleus	22.25	27.39
KRH15336	Soybean	cytosol	23.97	27.21
KRH05707	Soybean	cytosol	23.76	26.89
KRH28482	Soybean	cytosol	22.89	26.3
KRH15338	Soybean	cytosol	23.11	26.23
KRH15334	Soybean	cytosol	22.89	25.98
KRH05708	Soybean	cytosol	20.95	25.73
KRH48827	Soybean	cytosol, plastid	12.1	23.53
KRH48830	Soybean	extracellular, vacuole	21.17	23.45
KRH48829	Soybean	endoplasmic reticulum, extracellular	20.09	22.85
KRH15337	Soybean	cytosol	7.99	22.42

Protein Annotations

EntrezGene:100818727	Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	EMBL:ACUP02006641	InterPro:Acyl_Trfase/lysoPLipase	EnsemblPlantsGene:GLYMA_10G211300
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016042	GO:GO:0016787	UniProt:I1LD15	InterPro:IPR002641	EnsemblPlants:KRH34879	ProteinID:KRH34879
ProteinID:KRH34879.1	PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32241	SUPFAM:SSF52151
UniParc:UPI00023CE68C	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:44373760..44379361

Molecular Weight (calculated)

50069.6 Da

IEP (calculated)

6.527

GRAVY (calculated)

-0.217

Length

463 amino acids

Sequence
(BLAST)

001: MDCSNELDMQ EPSIETDKLS YEIFSILESK FLFGYDDPKL WFPKQIPPKP ESQTPAATAA VDCVSAVKNQ RGKICILAID GGGMRGILAG KALAYLEAAL
101: KKKSGDQNAT IADYFDVAAG AGVGGIFTAM LFSTKDHRRP IFSADDTWRF LAEKGNKFYR AGGSASNRGL LKRLLSSGGS GSVSSATAGL EKAVKEAFTA
201: ENGGGSLTLK DTLKPVLIPC YDLSSTAPFL FSRADALETD SFDFRLWEVC RATSAEPGLF EPVQMRSVDG QTKCVAVDGG LAMSNPTGAA ITHVLHNKQE
301: FPFVRGVEDL LVLSLGTGQL LEVSYDFDRV KRWKAKDWAR PMARISADGS SDLVDQAIAM AFGQCRSTNY VRIQANGSSM GRCGPNVDTD SSPGNVKMLV
401: GIAEEMLKQE NVESVLFGGK RIGEQSNFEK LDWFAGELVQ EHQRRSCRIA PTVAFKQATP KAT

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.