Factsheet for Os03t0254400-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028482_P001	Maize	cytosol	88.06	89.78
EER95163	Sorghum	cytosol	88.06	89.78
TraesCS4D01G221300.1	Wheat	cytosol	85.5	87.36
TraesCS4B01G221000.1	Wheat	cytosol	85.07	86.74
TraesCS4A01G083200.1	Wheat	cytosol	85.07	86.36
HORVU0Hr1G008670.3	Barley	cytosol	63.33	73.51
GSMUA_Achr5P03830_001	Banana	cytosol	58.85	63.59
GSMUA_Achr2P12330_001	Banana	cytosol	53.94	63.25
GSMUA_Achr5P18500_001	Banana	cytosol	51.6	62.37
GSMUA_Achr8P18860_001	Banana	cytosol	42.22	59.64
GSMUA_Achr11P...	Banana	mitochondrion	35.82	58.33
VIT_13s0019g04200.t01	Wine grape	cytosol	54.8	56.11
KRH34879	Soybean	cytosol	55.01	55.72
PGSC0003DMT400060317	Potato	cytosol	52.67	53.0
Solyc05g056030.2.1	Tomato	cytosol	52.67	53.0
CDX74862	Canola	cytosol	50.53	52.78
CDX67618	Canola	mitochondrion	50.75	51.07
CDY24974	Canola	cytosol	51.39	50.63
CDY07512	Canola	mitochondrion	50.96	50.32
CDY07662	Canola	cytosol	50.96	50.21
Bra003202.1-P	Field mustard	mitochondrion	50.96	50.21
Bra005058.1-P	Field mustard	cytosol	51.81	49.9
AT3G54950.1	Thale cress	mitochondrion	51.81	49.8
Bra000125.1-P	Field mustard	cytosol	51.17	49.69
CDY56960	Canola	mitochondrion	51.39	49.59
CDY44633	Canola	cytosol	50.96	49.18
CDX73423	Canola	mitochondrion	51.39	49.08
Bra007119.1-P	Field mustard	mitochondrion	51.6	48.79
AT2G39220.1	Thale cress	cytosol	50.96	47.9
CDY43526	Canola	nucleus	48.61	46.72
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	54.16	46.69
CDX68587	Canola	nucleus	49.47	46.49
AT4G29800.2	Thale cress	cytosol	49.89	44.49
Os03t0640000-00	Rice	cytosol	41.58	44.22
Os03t0784100-00	Rice	cytosol	43.5	43.4
Os06t0677000-00	Rice	plastid	38.17	37.21
Os07t0144500-00	Rice	mitochondrion, plastid	27.93	31.49
Os12t0611300-00	Rice	cytosol, peroxisome, plastid	33.48	30.08
Os08t0376500-00	Rice	plastid	15.78	28.46
Os03t0393900-01	Rice	mitochondrion	24.52	26.62
Os08t0477100-01	Rice	plastid	24.09	26.22
Os09t0462400-00	Rice	cytosol	18.98	26.02
Os08t0477500-01	Rice	plasma membrane	14.71	25.65
Os08t0476900-01	Rice	plastid	23.24	25.35
Os11t0614500-02	Rice	cytosol	13.22	25.31
Os11t0614400-01	Rice	plasma membrane	22.17	24.94
Os08t0376550-00	Rice	cytosol	9.17	23.76
Os01t0898500-01	Rice	plastid	20.26	23.11
Os12t0552200-01	Rice	cytosol, nucleus, plastid	19.62	20.58

Protein Annotations

Gene3D:3.40.1090.10	EntrezGene:4332284	MapMan:5.7.2.2.4	ProteinID:ABF95020.1	InterPro:Acyl_Trfase/lysoPLipase	ProteinID:BAF11500.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016042	GO:GO:0016787	InterPro:IPR002641	EnsemblPlantsGene:Os03g0254400	EnsemblPlants:Os03t0254400-01	PFAM:PF01734
InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32241	UniProt:Q10NY5	SUPFAM:SSF52151	UniParc:UPI0000DB4576
RefSeq:XP_015628140.1	SEG:seg	:	:	:	:

Description

Patatin-related phospholipase A III alphaPatatin-related phospholipase A, Modulation of longitudinal growth of vegetative tissues and seeds (Os03t0254400-01);Similar to patatin-like protein 3. (Os03t0254400-02)

Coordinates

chr3:+:8152539..8154731

Molecular Weight (calculated)

49704.0 Da

IEP (calculated)

6.644

GRAVY (calculated)

-0.143

Length

469 amino acids

Sequence
(BLAST)

001: MEEAEEMQVE RMQEEVEGGG ADTDKLSYEI FSILESKFLF GYTDPHQLWL PKAPAAQASA ATAVPSGKAA QRGKVCVLCV DGGGGGLRAL LSGRALAHLE
101: AALRRASGDP DARVADYFDL VAGTGAGGVF AAMLFSTHSR GAPLFHADDT WRLVADHAPR LFRKAVGGST SLFCRPKKRP LAAPTAALDA AMKTAFGEEL
201: TLRDTIKPVL ISCYDLKSSA PLVFSRADAL ESESYDFRLC EVGRAAWSEA GRFEPAEVAS VDGATSCAAV DGGPIMGSPA AAAITHVLHN KHEFPFVRGV
301: EDLLVLSIGG CSAGGTGAAA DADLRRLRRW GPKDWARPIA RIAADGAADL VDHAVARAFG QCRSSNYLRI QAKRESMPPC GPDGEYDPTP ANVHALLAAA
401: DEMLKHRNVE SVLFEGRRVG EQTNAERLDC FAAELVAEHR SRGSRIGPTV AFKQAPRKQP PAAAVAAMG

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.