CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007119.1-P	Field mustard	mitochondrion	99.18	97.18
CDX73423	Canola	mitochondrion	96.71	95.72
CDX67618	Canola	mitochondrion	88.07	91.85
CDY07512	Canola	mitochondrion	88.89	90.95
AT3G54950.1	Thale cress	mitochondrion	86.01	85.66
CDX74862	Canola	cytosol	71.19	77.06
CDY07662	Canola	cytosol	74.69	76.26
CDY24974	Canola	cytosol	74.49	76.05
CDY44633	Canola	cytosol	74.9	74.9
VIT_13s0019g04200.t01	Wine grape	cytosol	65.23	69.21
KRH34879	Soybean	cytosol	63.99	67.17
Solyc05g056030.2.1	Tomato	cytosol	61.93	64.59
PGSC0003DMT400060317	Potato	cytosol	61.73	64.38
GSMUA_Achr5P18500_001	Banana	cytosol	48.56	60.82
GSMUA_Achr2P12330_001	Banana	cytosol	49.79	60.5
GSMUA_Achr8P18860_001	Banana	cytosol	40.53	59.34
GSMUA_Achr5P03830_001	Banana	cytosol	52.47	58.76
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	64.2	57.35
CDY43526	Canola	nucleus	57.41	57.17
CDX68587	Canola	nucleus	58.44	56.91
GSMUA_Achr11P...	Banana	mitochondrion	32.1	54.17
EER95163	Sorghum	cytosol	50.21	53.04
Zm00001d028482_P001	Maize	cytosol	49.59	52.39
TraesCS4B01G221000.1	Wheat	cytosol	49.59	52.39
TraesCS4D01G221300.1	Wheat	cytosol	49.18	52.07
Os03t0254400-01	Rice	cytosol	49.59	51.39
TraesCS4A01G083200.1	Wheat	cytosol	48.77	51.3
CDY56455	Canola	cytosol	33.54	44.54
CDX89181	Canola	cytosol	34.36	43.15
CDX76689	Canola	cytosol	34.16	43.12
CDX93922	Canola	cytosol	33.95	42.64
HORVU0Hr1G008670.3	Barley	cytosol	34.77	41.83
CDY42720	Canola	cytosol	23.46	27.6
CDX72620	Canola	cytosol	23.25	27.43
CDX75621	Canola	cytosol	22.63	27.03
CDX75619	Canola	cytosol	22.63	26.96
CDX75620	Canola	cytosol, peroxisome, plastid	22.43	26.91
CDX69270	Canola	cytosol, peroxisome, plastid	22.43	26.91
CDY21469	Canola	cytosol, peroxisome, vacuole	22.43	26.78
CDX72619	Canola	cytosol	22.43	26.72
CDX69271	Canola	cytosol	22.22	26.54
CDX69269	Canola	cytosol	22.63	26.51
CDX83197	Canola	cytosol	22.02	26.29
CDY42719	Canola	cytosol	21.81	14.89

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	GO:A0A078J185	UniProt:A0A078J185	InterPro:Acyl_Trfase/lysoPLipase	EnsemblPlants:CDY56960
ProteinID:CDY56960	ProteinID:CDY56960.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00020357001	InterPro:IPR002641
PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32241	SUPFAM:SSF52151	UniParc:UPI0004EF2E29
SEG:seg	:	:	:	:	:

Description

BnaA09g55020DPatatin [Source:UniProtKB/TrEMBL;Acc:A0A078J185]

Coordinates

chrLK033535:+:29159..31334

Molecular Weight (calculated)

52650.6 Da

IEP (calculated)

8.351

GRAVY (calculated)

-0.338

Length

486 amino acids

Sequence
(BLAST)

001: MQRARSKPSG GRRTTTASVK HLIKQRGGDT AAATEAASVD DNSLLTDMQE PSVDTDKLSY EIFSILESKF LFGYDQDPKP EPEPVNSVVV DSVPGSVKNQ
101: RGKVCILSID GGGMRGIIPG KALAYLEHAL KSKSGDPNAR ISDYFDVAAG SGVGGIFTAM LFGSRDGDRP IFKAEDTWQF LTKNAKGLYG SSGSSSLMKR
201: VMRTGSSGSG TGKLKRVMKE SFSELTLKDT LKPVLIPCYD LKSSAPFLFS RADALETDGY DFRLWEVCRA TWAEPGVFEP VEMKSVDGKT KCVAIGGGLA
301: MSNPTAAAIT HVLHNKQEFP FVRGVEDLLV LSLGMGQLLD WTAKHWSRPA ALISNDGAAD TVDQAVAMAF GHCRSSNYVR IQANGSSLGP CKPSIDTDPS
401: GSNVNMLVGV AEEMLKQKNV ESVLFGGKRI DEQSNFEKLD WLAGELVLEH QRRNSRIAPT VAFKQSVHRA DQKTRDKDIG VTARER

Best Arabidopsis Sequence Match ( AT3G54950.1 )
(BLAST)

001: MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER

Arabidopsis Description

PLP7Patatin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV43]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.