CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017799.1-P	Field mustard	cytosol	92.98	93.2
CDX72620	Canola	cytosol	91.53	91.75
CDX75621	Canola	cytosol	78.93	80.1
CDX69271	Canola	cytosol	77.72	78.87
AT4G37050.1	Thale cress	cytosol	79.66	76.87
KRH28482	Soybean	cytosol	58.84	60.3
PGSC0003DMT400040781	Potato	cytosol	57.63	59.65
VIT_07s0031g00860.t01	Wine grape	cytosol	58.35	59.07
Solyc02g090630.2.1	Tomato	cytosol	56.17	58.73
CDX75619	Canola	cytosol	57.38	58.09
CDX75620	Canola	cytosol, peroxisome, plastid	56.9	58.02
CDX72619	Canola	cytosol	57.14	57.84
CDX69270	Canola	cytosol, peroxisome, plastid	56.66	57.78
VIT_07s0031g00870.t01	Wine grape	cytosol	56.9	57.74
VIT_07s0031g00850.t01	Wine grape	cytosol, peroxisome, plastid	55.69	57.21
CDX83197	Canola	cytosol	54.96	55.77
CDY21469	Canola	cytosol, peroxisome, vacuole	54.96	55.77
CDX69269	Canola	cytosol	55.93	55.66
GSMUA_Achr3P06850_001	Banana	cytosol	54.0	54.66
CDY42719	Canola	cytosol	56.9	33.01
CDX74862	Canola	cytosol	27.6	25.39
CDY07662	Canola	cytosol	28.33	24.58
CDY24974	Canola	cytosol	28.33	24.58
CDY44633	Canola	cytosol	28.57	24.28
CDX67618	Canola	mitochondrion	27.12	24.03
CDX89181	Canola	cytosol	22.52	24.03
CDX93922	Canola	cytosol	22.28	23.77
CDY56455	Canola	cytosol	20.82	23.5
CDY56960	Canola	mitochondrion	27.6	23.46
CDX73423	Canola	mitochondrion	27.6	23.22
CDX76689	Canola	cytosol	21.55	23.12
CDY07512	Canola	mitochondrion	26.15	22.74
CDY43526	Canola	nucleus	25.42	21.52
CDX68587	Canola	nucleus	25.67	21.24

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	GO:A0A078HW65	UniProt:A0A078HW65	InterPro:Acyl_Trfase/lysoPLipase	EnsemblPlants:CDY42720
ProteinID:CDY42720	ProteinID:CDY42720.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00075258001	InterPro:IPR002641
PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF24	SUPFAM:SSF52151
UniParc:UPI0004EE5C3F	SEG:seg	:	:	:	:

Description

BnaA03g53730DPatatin [Source:UniProtKB/TrEMBL;Acc:A0A078HW65]

Coordinates

chrLK032532:+:241670..243746

Molecular Weight (calculated)

46299.8 Da

IEP (calculated)

6.425

GRAVY (calculated)

-0.128

Length

413 amino acids

Sequence
(BLAST)

001: MEFSSERRVS CLPPSYGQLV TILSIDGGGI RGIIPGTILA YLESQLQELD GEEARLVDYF DVISGTSTGG LIVAMLTAED KDVKNSRNRS RPLFAAKEIV
101: PFYLKHSPKI FPQHRGVCSW AQTMRRLVRG PKYNGKYLHE VILGCLGDTR LTQTMTNVVI PCFDIKKLQP VIFSSYQAVN HQVIDAKLSD ICISTSAAPT
201: YFPAHRFINE DNEGKKHEFN LIDGGIAANN PTLCAIAEVT KQIVKKNPEM GEIIPLDYTR FVVISLGTGS IRNQEKYDAK MASKWGMLSW IYGNGSTPIL
301: DCYSEAIHDM VDYQSSVVFQ ALRSENNYLR IDDDTLKGDL SSVDLSTEEN MEGLVQVGEA LLKKNVSRVN LETGHYEPIS DHVTNEEALK RLIIFLLIKK
401: KVNNFFIYIC IWL

Best Arabidopsis Sequence Match ( AT4G37050.1 )
(BLAST)

001: MDTERGSISS SEISRTAHLQ DRTVACLPPS YGQLVTILSI DGGGIRGIIP GTILAYLESQ LQELDGEEAR LVDYFDVISG TSTGGLIVAM LTAQDQSGGH
101: SRNSNRPLFE AKEIVPFYLK HSPKIFPQPR GIFCGWGETI VRLVGGPKFN GKYLHDLVEG FLGDTKLTQS LTNVVIPCFD IKKLQPVIFS SYQAVNNQAM
201: NAKLSDICIS TSAAPTFFPA HRFTNEDSEG IKHEFNLIDG GIAANNPTLC AIAEVTKQII KKNPVMGDIS PLDFTRFLVI SIGTGSIRNQ EKYNAKMASK
301: WGLMCWVFES GSTPILDCYS EAIHDMVDYQ SSVVFQALRS EKNYLRIDDD SLKGDLGSVD ISTEKNMEGL VEVGEALLKK RVSRVNLESG HYQPISENVT
401: NEEALKRFAK VLSEERKLRE SRSPKLKI

Arabidopsis Description

PLP3Patatin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O23181]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.